Loop Id: 16791 | Module: libgromacs_mpi.so.9.0.0 | Source: bonded.cpp:1157-1178 [...] | Coverage: 0.03% |
---|
Loop Id: 16791 | Module: libgromacs_mpi.so.9.0.0 | Source: bonded.cpp:1157-1178 [...] | Coverage: 0.03% |
---|
0xbc4ef0 MOVL $0,(%RSP,%RDI,1) [3] |
0xbc4ef7 MOVL $0,0x40(%RSP,%RDI,1) [3] |
0xbc4eff ADD $0x4,%RDI |
0xbc4f03 CMP $0x40,%RDI |
0xbc4f07 JE bc4460 |
0xbc4f0d MOVSXD %R8D,%R10 |
0xbc4f10 MOVSXD (%R12,%R10,4),%R9 [1] |
0xbc4f14 MOV 0x4(%R12,%R10,4),%R11D [1] |
0xbc4f19 MOV %R11D,0x5c0(%RSP,%RDI,1) [3] |
0xbc4f21 MOV 0x8(%R12,%R10,4),%R11D [1] |
0xbc4f26 MOV %R11D,0x580(%RSP,%RDI,1) [3] |
0xbc4f2e MOV 0xc(%R12,%R10,4),%R10D [1] |
0xbc4f33 MOV %R10D,0x540(%RSP,%RDI,1) [3] |
0xbc4f3b LEA (%RSI,%RDI,1),%R10 |
0xbc4f3f CMP %RDX,%R10 |
0xbc4f42 JAE bc4ef0 |
0xbc4f44 LEA (%R9,%R9,2),%R9 |
0xbc4f48 SAL $0x4,%R9 |
0xbc4f4c VMOVSS 0x4(%R15,%R9,1),%XMM11 [2] |
0xbc4f53 VMOVSS %XMM11,(%RSP,%RDI,1) [3] |
0xbc4f58 VMOVSS (%R15,%R9,1),%XMM11 [2] |
0xbc4f5e VMOVSS %XMM11,0x40(%RSP,%RDI,1) [3] |
0xbc4f64 LEA 0x4(%R8),%R9D |
0xbc4f68 CMP %R13D,%R9D |
0xbc4f6b CMOVL %R9D,%R8D |
0xbc4f6f ADD $0x4,%RDI |
0xbc4f73 CMP $0x40,%RDI |
0xbc4f77 JNE bc4f0d |
/home/eoseret/gromacs-2024.2/src/gromacs/listed_forces/bonded.cpp: 1157 - 1178 |
-------------------------------------------------------------------------------- |
1157: for (s = 0; s < GMX_SIMD_REAL_WIDTH; s++) |
1158: { |
1159: type = forceatoms[iu]; |
1160: ai[s] = forceatoms[iu + 1]; |
1161: aj[s] = forceatoms[iu + 2]; |
1162: ak[s] = forceatoms[iu + 3]; |
1163: |
1164: /* At the end fill the arrays with the last atoms and 0 params */ |
1165: if (i + s * nfa1 < nbonds) |
1166: { |
1167: coeff[s] = forceparams[type].harmonic.krA; |
1168: coeff[GMX_SIMD_REAL_WIDTH + s] = forceparams[type].harmonic.rA; |
1169: |
1170: if (iu + nfa1 < nbonds) |
[...] |
1177: coeff[s] = 0; |
1178: coeff[GMX_SIMD_REAL_WIDTH + s] = 0; |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►100.00+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►100.00+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►100.00+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►72.13+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►13.93+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
►13.93+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►82.71+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►12.78+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
►4.51+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►88.50+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►10.62+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►99.09+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►83.05+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 | |
►11.86+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
►5.08+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
Coverage (%) | Name | Source Location | Module |
---|---|---|---|
►100.00+ | calculateSimpleBond(int, int, [...] | bonded.cpp:4143 | libgromacs_mpi.so.9.0.0 |
○ | (anonymous namespace)::calc_on[...] | listed_forces.cpp:356 | libgromacs_mpi.so.9.0.0 |
○ | .omp_outlined.#0xbe5d40 | listed_forces.cpp:428 | libgromacs_mpi.so.9.0.0 |
○ | __kmp_invoke_microtask | libomp.so | |
○ | __kmp_fork_call | libomp.so | |
○ | __kmpc_fork_call | libomp.so | |
○ | ListedForces::calculate(gmx_wa[...] | listed_forces.cpp:387 | libgromacs_mpi.so.9.0.0 |
○ | do_force(_IO_FILE*, t_commrec [...] | sim_util.cpp:2047 | libgromacs_mpi.so.9.0.0 |
○ | gmx::LegacySimulator::do_md() | md.cpp:1248 | libgromacs_mpi.so.9.0.0 |
○ | gmx::Mdrunner::mdrunner() | runner.cpp:2311 | libgromacs_mpi.so.9.0.0 |
○ | gmx::gmx_mdrun(int, gmx_hw_inf[...] | mdrun.cpp:280 | gmx_mpi |
○ | gmx::gmx_mdrun(int, char**) | mdrun.cpp:82 | gmx_mpi |
○ | gmx::CommandLineModuleManager:[...] | cmdlinemodulemanager.cpp:569 | libgromacs_mpi.so.9.0.0 |
○ | main | gmx.cpp:58 | gmx_mpi |
○ | __libc_start_call_main | libc.so.6 |
Path / |
Metric | Value |
---|---|
CQA speedup if no scalar integer | 1.33 |
CQA speedup if FP arith vectorized | 1.00 |
CQA speedup if fully vectorized | 9.41 |
CQA speedup if no inter-iteration dependency | NA |
CQA speedup if next bottleneck killed | 1.27 |
Bottlenecks | |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source | bonded.cpp:1157-1170,bonded.cpp:1177-1178 |
Source loop unroll info | not unrolled or unrolled with no peel/tail loop |
Source loop unroll confidence level | max |
Unroll/vectorization loop type | NA |
Unroll factor | NA |
CQA cycles | 3.33 |
CQA cycles if no scalar integer | 2.50 |
CQA cycles if FP arith vectorized | 3.33 |
CQA cycles if fully vectorized | 0.35 |
Front-end cycles | 3.08 |
P0 cycles | 2.13 |
P1 cycles | 2.13 |
P2 cycles | 2.13 |
P3 cycles | 2.13 |
P4 cycles | 1.00 |
P5 cycles | 3.33 |
P6 cycles | 3.33 |
P7 cycles | 3.33 |
P8 cycles | 0.00 |
P9 cycles | 0.00 |
P10 cycles | 0.00 |
P11 cycles | 0.00 |
P12 cycles | 0.50 |
P13 cycles | 0.50 |
DIV/SQRT cycles | 0.00 |
Inter-iter dependencies cycles | 2 |
FE+BE cycles (UFS) | NA |
Stall cycles (UFS) | NA |
Nb insns | 19.50 |
Nb uops | 18.50 |
Nb loads | 5.00 |
Nb stores | 5.00 |
Nb stack references | 0.00 |
FLOP/cycle | 0.00 |
Nb FLOP add-sub | 0.00 |
Nb FLOP mul | 0.00 |
Nb FLOP fma | 0.00 |
Nb FLOP div | 0.00 |
Nb FLOP rcp | 0.00 |
Nb FLOP sqrt | 0.00 |
Nb FLOP rsqrt | 0.00 |
Bytes/cycle | 12.00 |
Bytes prefetched | 0.00 |
Bytes loaded | 20.00 |
Bytes stored | 20.00 |
Stride 0 | 0.00 |
Stride 1 | 1.00 |
Stride n | 1.00 |
Stride unknown | 0.50 |
Stride indirect | 0.00 |
Vectorization ratio all | 0.00 |
Vectorization ratio load | 0.00 |
Vectorization ratio store | 0.00 |
Vectorization ratio mul | NA |
Vectorization ratio add_sub | NA |
Vectorization ratio fma | NA |
Vectorization ratio div_sqrt | NA |
Vectorization ratio other | 0.00 |
Vector-efficiency ratio all | 7.23 |
Vector-efficiency ratio load | 7.29 |
Vector-efficiency ratio store | 6.25 |
Vector-efficiency ratio mul | NA |
Vector-efficiency ratio add_sub | NA |
Vector-efficiency ratio fma | NA |
Vector-efficiency ratio div_sqrt | NA |
Vector-efficiency ratio other | 10.94 |
Metric | Value |
---|---|
CQA speedup if no scalar integer | 1.83 |
CQA speedup if FP arith vectorized | 1.00 |
CQA speedup if fully vectorized | 9.26 |
CQA speedup if no inter-iteration dependency | NA |
CQA speedup if next bottleneck killed | 1.33 |
Bottlenecks | P5, P6, P7, |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source | bonded.cpp:1157-1170,bonded.cpp:1177-1178 |
Source loop unroll info | not unrolled or unrolled with no peel/tail loop |
Source loop unroll confidence level | max |
Unroll/vectorization loop type | NA |
Unroll factor | NA |
CQA cycles | 3.67 |
CQA cycles if no scalar integer | 2.00 |
CQA cycles if FP arith vectorized | 3.67 |
CQA cycles if fully vectorized | 0.40 |
Front-end cycles | 3.67 |
P0 cycles | 2.75 |
P1 cycles | 2.75 |
P2 cycles | 2.75 |
P3 cycles | 2.75 |
P4 cycles | 1.00 |
P5 cycles | 3.67 |
P6 cycles | 3.67 |
P7 cycles | 3.67 |
P8 cycles | 0.00 |
P9 cycles | 0.00 |
P10 cycles | 0.00 |
P11 cycles | 0.00 |
P12 cycles | 1.00 |
P13 cycles | 1.00 |
DIV/SQRT cycles | 0.00 |
Inter-iter dependencies cycles | 2 |
FE+BE cycles (UFS) | NA |
Stall cycles (UFS) | NA |
Nb insns | 23.00 |
Nb uops | 22.00 |
Nb loads | 6.00 |
Nb stores | 5.00 |
Nb stack references | 0.00 |
FLOP/cycle | 0.00 |
Nb FLOP add-sub | 0.00 |
Nb FLOP mul | 0.00 |
Nb FLOP fma | 0.00 |
Nb FLOP div | 0.00 |
Nb FLOP rcp | 0.00 |
Nb FLOP sqrt | 0.00 |
Nb FLOP rsqrt | 0.00 |
Bytes/cycle | 12.00 |
Bytes prefetched | 0.00 |
Bytes loaded | 24.00 |
Bytes stored | 20.00 |
Stride 0 | 0.00 |
Stride 1 | 1.00 |
Stride n | 1.00 |
Stride unknown | 1.00 |
Stride indirect | 0.00 |
Vectorization ratio all | 0.00 |
Vectorization ratio load | 0.00 |
Vectorization ratio store | 0.00 |
Vectorization ratio mul | NA |
Vectorization ratio add_sub | NA |
Vectorization ratio fma | NA |
Vectorization ratio div_sqrt | NA |
Vectorization ratio other | 0.00 |
Vector-efficiency ratio all | 6.82 |
Vector-efficiency ratio load | 6.25 |
Vector-efficiency ratio store | 6.25 |
Vector-efficiency ratio mul | NA |
Vector-efficiency ratio add_sub | NA |
Vector-efficiency ratio fma | NA |
Vector-efficiency ratio div_sqrt | NA |
Vector-efficiency ratio other | 9.38 |
Metric | Value |
---|---|
CQA speedup if no scalar integer | 1.00 |
CQA speedup if FP arith vectorized | 1.00 |
CQA speedup if fully vectorized | 9.60 |
CQA speedup if no inter-iteration dependency | NA |
CQA speedup if next bottleneck killed | 1.20 |
Bottlenecks | P5, P6, P7, |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source | bonded.cpp:1157-1170,bonded.cpp:1177-1178 |
Source loop unroll info | not unrolled or unrolled with no peel/tail loop |
Source loop unroll confidence level | max |
Unroll/vectorization loop type | NA |
Unroll factor | NA |
CQA cycles | 3.00 |
CQA cycles if no scalar integer | 3.00 |
CQA cycles if FP arith vectorized | 3.00 |
CQA cycles if fully vectorized | 0.31 |
Front-end cycles | 2.50 |
P0 cycles | 1.50 |
P1 cycles | 1.50 |
P2 cycles | 1.50 |
P3 cycles | 1.50 |
P4 cycles | 1.00 |
P5 cycles | 3.00 |
P6 cycles | 3.00 |
P7 cycles | 3.00 |
P8 cycles | 0.00 |
P9 cycles | 0.00 |
P10 cycles | 0.00 |
P11 cycles | 0.00 |
P12 cycles | 0.00 |
P13 cycles | 0.00 |
DIV/SQRT cycles | 0.00 |
Inter-iter dependencies cycles | 2 |
FE+BE cycles (UFS) | NA |
Stall cycles (UFS) | NA |
Nb insns | 16.00 |
Nb uops | 15.00 |
Nb loads | 4.00 |
Nb stores | 5.00 |
Nb stack references | 0.00 |
FLOP/cycle | 0.00 |
Nb FLOP add-sub | 0.00 |
Nb FLOP mul | 0.00 |
Nb FLOP fma | 0.00 |
Nb FLOP div | 0.00 |
Nb FLOP rcp | 0.00 |
Nb FLOP sqrt | 0.00 |
Nb FLOP rsqrt | 0.00 |
Bytes/cycle | 12.00 |
Bytes prefetched | 0.00 |
Bytes loaded | 16.00 |
Bytes stored | 20.00 |
Stride 0 | 0.00 |
Stride 1 | 1.00 |
Stride n | 1.00 |
Stride unknown | 0.00 |
Stride indirect | 0.00 |
Vectorization ratio all | 0.00 |
Vectorization ratio load | 0.00 |
Vectorization ratio store | 0.00 |
Vectorization ratio mul | NA |
Vectorization ratio add_sub | NA |
Vectorization ratio fma | NA |
Vectorization ratio div_sqrt | NA |
Vectorization ratio other | 0.00 |
Vector-efficiency ratio all | 7.64 |
Vector-efficiency ratio load | 8.33 |
Vector-efficiency ratio store | 6.25 |
Vector-efficiency ratio mul | NA |
Vector-efficiency ratio add_sub | NA |
Vector-efficiency ratio fma | NA |
Vector-efficiency ratio div_sqrt | NA |
Vector-efficiency ratio other | 12.50 |
Path / |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source file and lines | bonded.cpp:1157-1178 |
Module | libgromacs_mpi.so.9.0.0 |
nb instructions | 19.50 |
nb uops | 18.50 |
loop length | 96 |
used x86 registers | 10 |
used mmx registers | 0 |
used xmm registers | 0.50 |
used ymm registers | 0 |
used zmm registers | 0 |
nb stack references | 0 |
micro-operation queue | 3.08 cycles |
front end | 3.08 cycles |
ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
uops | 2.13 | 2.13 | 2.13 | 2.13 | 1.00 | 3.33 | 3.33 | 3.33 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 0.50 |
cycles | 2.13 | 2.13 | 2.13 | 2.13 | 1.00 | 3.33 | 3.33 | 3.33 | 0.00 | 0.00 | 0.00 | 0.00 | 0.50 | 0.50 |
Cycles executing div or sqrt instructions | NA |
Longest recurrence chain latency (RecMII) | 2.00 |
Front-end | 3.08 |
Dispatch | 3.33 |
Data deps. | 2.00 |
Overall L1 | 3.33 |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
other | 0% |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | NA (no other vectorizable/vectorized instructions) |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 0% |
all | 7% |
load | 7% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
other | 10% |
all | 6% |
load | 6% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | NA (no other vectorizable/vectorized instructions) |
all | 7% |
load | 7% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 10% |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source file and lines | bonded.cpp:1157-1178 |
Module | libgromacs_mpi.so.9.0.0 |
nb instructions | 23 |
nb uops | 22 |
loop length | 108 |
used x86 registers | 11 |
used mmx registers | 0 |
used xmm registers | 1 |
used ymm registers | 0 |
used zmm registers | 0 |
nb stack references | 0 |
micro-operation queue | 3.67 cycles |
front end | 3.67 cycles |
ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
uops | 2.75 | 2.75 | 2.75 | 2.75 | 1.00 | 3.67 | 3.67 | 3.67 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 |
cycles | 2.75 | 2.75 | 2.75 | 2.75 | 1.00 | 3.67 | 3.67 | 3.67 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 |
Cycles executing div or sqrt instructions | NA |
Longest recurrence chain latency (RecMII) | 2.00 |
Front-end | 3.67 |
Dispatch | 3.67 |
Data deps. | 2.00 |
Overall L1 | 3.67 |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
other | 0% |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | NA (no other vectorizable/vectorized instructions) |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 0% |
all | 7% |
load | 6% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
other | 9% |
all | 6% |
load | 6% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | NA (no other vectorizable/vectorized instructions) |
all | 6% |
load | 6% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 9% |
Instruction | Nb FU | ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | Latency | Recip. throughput | Vectorization |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MOVSXD %R8D,%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOVSXD (%R12,%R10,4),%R9 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
MOV 0x4(%R12,%R10,4),%R11D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | scal (6.3%) |
MOV %R11D,0x5c0(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
MOV 0x8(%R12,%R10,4),%R11D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | scal (6.3%) |
MOV %R11D,0x580(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
MOV 0xc(%R12,%R10,4),%R10D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
MOV %R10D,0x540(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
LEA (%RSI,%RDI,1),%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP %RDX,%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | scal (12.5%) |
JAE bc4ef0 <_ZN12_GLOBAL__N_16anglesIL18BondedKernelFlavor0EEENSt9enable_ifIXeqT_LS1_0EEfE4typeEiPKiPK9t_iparamsPA3_KfPA4_fPA3_fPK5t_pbcfPfN3gmx8ArrayRefISA_EEP8t_fcdataP12t_disresdataP12t_oriresdataPi+0xc90> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
LEA (%R9,%R9,2),%R9 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
SAL $0x4,%R9 | 1 | 0 | 0.50 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | N/A |
VMOVSS 0x4(%R15,%R9,1),%XMM11 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
VMOVSS %XMM11,(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 1 | 1 | scal (6.3%) |
VMOVSS (%R15,%R9,1),%XMM11 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
VMOVSS %XMM11,0x40(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 1 | 1 | scal (6.3%) |
LEA 0x4(%R8),%R9D | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP %R13D,%R9D | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | scal (6.3%) |
CMOVL %R9D,%R8D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | N/A |
ADD $0x4,%RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP $0x40,%RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
JNE bc4f0d <_ZN12_GLOBAL__N_16anglesIL18BondedKernelFlavor0EEENSt9enable_ifIXeqT_LS1_0EEfE4typeEiPKiPK9t_iparamsPA3_KfPA4_fPA3_fPK5t_pbcfPfN3gmx8ArrayRefISA_EEP8t_fcdataP12t_disresdataP12t_oriresdataPi+0xcad> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
Function | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*, gmx::ArrayRef |
Source file and lines | bonded.cpp:1157-1178 |
Module | libgromacs_mpi.so.9.0.0 |
nb instructions | 16 |
nb uops | 15 |
loop length | 84 |
used x86 registers | 9 |
used mmx registers | 0 |
used xmm registers | 0 |
used ymm registers | 0 |
used zmm registers | 0 |
nb stack references | 0 |
micro-operation queue | 2.50 cycles |
front end | 2.50 cycles |
ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
uops | 1.50 | 1.50 | 1.50 | 1.50 | 1.00 | 3.00 | 3.00 | 3.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
cycles | 1.50 | 1.50 | 1.50 | 1.50 | 1.00 | 3.00 | 3.00 | 3.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Cycles executing div or sqrt instructions | NA |
Longest recurrence chain latency (RecMII) | 2.00 |
Front-end | 2.50 |
Dispatch | 3.00 |
Data deps. | 2.00 |
Overall L1 | 3.00 |
all | 0% |
load | 0% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 0% |
all | 7% |
load | 8% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 12% |
Instruction | Nb FU | ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | Latency | Recip. throughput | Vectorization |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MOVL $0,(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
MOVL $0,0x40(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
ADD $0x4,%RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP $0x40,%RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | scal (12.5%) |
JE bc4460 <_ZN12_GLOBAL__N_16anglesIL18BondedKernelFlavor0EEENSt9enable_ifIXeqT_LS1_0EEfE4typeEiPKiPK9t_iparamsPA3_KfPA4_fPA3_fPK5t_pbcfPfN3gmx8ArrayRefISA_EEP8t_fcdataP12t_disresdataP12t_oriresdataPi+0x200> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
MOVSXD %R8D,%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOVSXD (%R12,%R10,4),%R9 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | scal (12.5%) |
MOV 0x4(%R12,%R10,4),%R11D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | scal (6.3%) |
MOV %R11D,0x5c0(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
MOV 0x8(%R12,%R10,4),%R11D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | scal (6.3%) |
MOV %R11D,0x580(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
MOV 0xc(%R12,%R10,4),%R10D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
MOV %R10D,0x540(%RSP,%RDI,1) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
LEA (%RSI,%RDI,1),%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP %RDX,%R10 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
JAE bc4ef0 <_ZN12_GLOBAL__N_16anglesIL18BondedKernelFlavor0EEENSt9enable_ifIXeqT_LS1_0EEfE4typeEiPKiPK9t_iparamsPA3_KfPA4_fPA3_fPK5t_pbcfPfN3gmx8ArrayRefISA_EEP8t_fcdataP12t_disresdataP12t_oriresdataPi+0xc90> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
Run 1x1 | Number processes: 1Number processes per node: 1OMP_NUM_THREADS: 1 |
---|---|
Run 2x1 | Number processes: 2Number processes per node: 2OMP_NUM_THREADS: 1 |
Run 4x1 | Number processes: 4Number processes per node: 4OMP_NUM_THREADS: 1 |
Run 8x1 | Number processes: 8Number processes per node: 8OMP_NUM_THREADS: 1 |
Run 16x1 | Number processes: 16Number processes per node: 16OMP_NUM_THREADS: 1 |
Run 32x1 | Number processes: 32Number processes per node: 32OMP_NUM_THREADS: 1 |
Run 64x1 | Number processes: 64Number processes per node: 64OMP_NUM_THREADS: 1 |
Run 128x1 | Number processes: 128Number processes per node: 128OMP_NUM_THREADS: 1 |
Run 192x1 | Number processes: 192Number nodes: 1Number processes per node: 192Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 -pin on -deffnm aoccMPI Command: mpirun -genv I_MPI_FABRICS=shm -n <number_processes>Dataset: Run Directory: .OMP_NUM_THREADS: 1 |
(1x1) Efficiency | (1x1) Potential Speed-Up (%) | (2x1) Efficiency | (2x1) Potential Speed-Up (%) | (4x1) Efficiency | (4x1) Potential Speed-Up (%) | (8x1) Efficiency | (8x1) Potential Speed-Up (%) | (16x1) Efficiency | (16x1) Potential Speed-Up (%) | (32x1) Efficiency | (32x1) Potential Speed-Up (%) | (64x1) Efficiency | (64x1) Potential Speed-Up (%) | (128x1) Efficiency | (128x1) Potential Speed-Up (%) | (192x1) Efficiency | (192x1) Potential Speed-Up (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0 | 1.04 | -0 | 0.9 | 0.01 | 0.91 | 0 | 0.83 | 0.01 | 0.98 | 0 | 1.01 | -0 | 0.93 | 0 | 0.77 | 0.01 |
Run | Number of threads | Efficiency (ideal is 1) | Speedup | Ideal Speedup | Time (s) | Coverage (%) |
---|---|---|---|---|---|---|
1x1 | 1 | 1 | 1 | 1 | 0.55499994754791 | 0.066578313708305 |
2x1 | 2 | 1.04 | 2.07 | 2 | 0.30500000715256 | 0.059015620499849 |
4x1 | 4 | 0.9 | 3.61 | 4 | 0.24499993026257 | 0.061749760061502 |
8x1 | 8 | 0.91 | 7.28 | 8 | 0.11000000685453 | 0.049300074577332 |
16x1 | 16 | 0.83 | 13.29 | 16 | 0.099999994039536 | 0.050478529185057 |
32x1 | 18 | 0.98 | 31.4 | 32 | 0.070000000298023 | 0.03439562022686 |
64x1 | 29 | 1.01 | 64.36 | 64 | 0.049999997019768 | 0.02169619128108 |
128x1 | 50 | 0.93 | 118.7 | 128 | 0.035000000149012 | 0.027511531487107 |
192x1 | 71 | 0.77 | 148.57 | 192 | 0.035000000149012 | 0.027732321992517 |