Loop Id: 3355 | Module: libgromacs_mpi.so.9.0.0 | Source: localtopology.cpp:506-531 [...] | Coverage: NA% |
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Loop Id: 3355 | Module: libgromacs_mpi.so.9.0.0 | Source: localtopology.cpp:506-531 [...] | Coverage: NA% |
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0x6aec80 MOV (%RDX,%RDI,4),%ESI [4] |
0x6aec83 ADD -0x58(%RBP),%ESI [3] |
0x6aec86 SUB -0x90(%RBP),%ESI [3] |
0x6aec8c MOVSXD %ESI,%R12 |
0x6aec8f MOVSXD 0x4(%R8,%R12,8),%RSI [1] |
0x6aec94 CMP $-0x1,%RSI |
0x6aec98 JE 6aefba |
0x6aec9e CMP -0x8c(%RBP),%ESI [3] |
0x6aeca4 JGE 6aefba |
0x6aecaa MOV (%R8,%R12,8),%R12D [1] |
0x6aecae MOV %R12D,-0xb0(%RBP,%RDI,4) [3] |
0x6aecb6 LEA (%RSI,%RSI,2),%RSI |
0x6aecba MOV -0xf8(%RBP),%R12 [3] |
0x6aecc1 VPSHUFD $-0x5c,(%R12,%RSI,4),%XMM0 [2] |
0x6aecc8 VPTESTNMD %XMM0,%XMM0,%K0 |
0x6aecce KSHIFTRB $0x2,%K0,%K1 |
0x6aecd4 KSHIFTRB $0x1,%K0,%K2 |
0x6aecda KMOVD %K0,%ESI |
0x6aecde TEST $0x1,%SIL |
0x6aece2 KMOVD %K2,%ESI |
0x6aece6 CMOVNE %EDI,%EAX |
0x6aece9 CMOVE %EDI,%ECX |
0x6aecec CMOVNE %EDI,%R9D |
0x6aecf0 TEST $0x1,%SIL |
0x6aecf4 KMOVD %K1,%ESI |
0x6aecf8 CMOVNE %EDI,%EBX |
0x6aecfb CMOVE %EDI,%R15D |
0x6aecff CMOVNE %EDI,%R11D |
0x6aed03 TEST $0x1,%SIL |
0x6aed07 CMOVNE %EDI,%R14D |
0x6aed0b CMOVE %EDI,%R13D |
0x6aed0f CMOVNE %EDI,%R10D |
0x6aed13 MOV -0xd0(%RBP),%RSI [3] |
0x6aed1a ADD %RDI,%RSI |
0x6aed1d INC %RSI |
0x6aed20 INC %RDI |
0x6aed23 CMP $0x1,%RSI |
0x6aed27 JNE 6aec80 |
/home/eoseret/gromacs-2024.2/src/gromacs/domdec/localtopology.cpp: 506 - 531 |
-------------------------------------------------------------------------------- |
506: for (int k = 1; k <= nral && bUse; k++) |
507: { |
508: /* Get the global index using the offset in the molecule */ |
509: const int k_gl = atomIndexSet.global + iatoms[k] - atomIndexSet.withinMolecule; |
[...] |
528: tiatoms[k] = entry->la; |
529: for (int d = 0; d < DIM; d++) |
530: { |
531: if (zones.shift[entry->cell][d] == 0) |
/home/eoseret/gromacs-2024.2/src/gromacs/domdec/ga2la.h: 114 - 114 |
-------------------------------------------------------------------------------- |
114: return (data_.direct[a_gl].cell == -1) ? nullptr : &(data_.direct[a_gl]); |
Path / |
Metric | Value |
---|---|
CQA speedup if no scalar integer | 3.36 |
CQA speedup if FP arith vectorized | 1.00 |
CQA speedup if fully vectorized | 9.55 |
CQA speedup if no inter-iteration dependency | NA |
CQA speedup if next bottleneck killed | 1.07 |
Bottlenecks | micro-operation queue, |
Function | int assignInteractionsForAtom |
Source | localtopology.cpp:506-509,localtopology.cpp:528-531,ga2la.h:114-114 |
Source loop unroll info | not unrolled or unrolled with no peel/tail loop |
Source loop unroll confidence level | max |
Unroll/vectorization loop type | NA |
Unroll factor | NA |
CQA cycles | 6.17 |
CQA cycles if no scalar integer | 1.83 |
CQA cycles if FP arith vectorized | 6.17 |
CQA cycles if fully vectorized | 0.65 |
Front-end cycles | 6.17 |
P0 cycles | 5.75 |
P1 cycles | 5.75 |
P2 cycles | 5.75 |
P3 cycles | 5.75 |
P4 cycles | 2.00 |
P5 cycles | 3.33 |
P6 cycles | 3.33 |
P7 cycles | 3.33 |
P8 cycles | 0.50 |
P9 cycles | 1.17 |
P10 cycles | 1.33 |
P11 cycles | 1.00 |
P12 cycles | 1.50 |
P13 cycles | 1.50 |
DIV/SQRT cycles | 0.00 |
Inter-iter dependencies cycles | 1 |
FE+BE cycles (UFS) | NA |
Stall cycles (UFS) | NA |
Nb insns | 38.00 |
Nb uops | 37.00 |
Nb loads | 9.00 |
Nb stores | 1.00 |
Nb stack references | 5.00 |
FLOP/cycle | 0.00 |
Nb FLOP add-sub | 0.00 |
Nb FLOP mul | 0.00 |
Nb FLOP fma | 0.00 |
Nb FLOP div | 0.00 |
Nb FLOP rcp | 0.00 |
Nb FLOP sqrt | 0.00 |
Nb FLOP rsqrt | 0.00 |
Bytes/cycle | 9.73 |
Bytes prefetched | 0.00 |
Bytes loaded | 56.00 |
Bytes stored | 4.00 |
Stride 0 | 1.00 |
Stride 1 | 2.00 |
Stride n | 1.00 |
Stride unknown | 0.00 |
Stride indirect | 1.00 |
Vectorization ratio all | 14.29 |
Vectorization ratio load | 50.00 |
Vectorization ratio store | 0.00 |
Vectorization ratio mul | NA |
Vectorization ratio add_sub | NA |
Vectorization ratio fma | NA |
Vectorization ratio div_sqrt | NA |
Vectorization ratio other | 15.38 |
Vector-efficiency ratio all | 9.38 |
Vector-efficiency ratio load | 15.63 |
Vector-efficiency ratio store | 6.25 |
Vector-efficiency ratio mul | NA |
Vector-efficiency ratio add_sub | NA |
Vector-efficiency ratio fma | NA |
Vector-efficiency ratio div_sqrt | NA |
Vector-efficiency ratio other | 9.62 |
Metric | Value |
---|---|
CQA speedup if no scalar integer | 3.36 |
CQA speedup if FP arith vectorized | 1.00 |
CQA speedup if fully vectorized | 9.55 |
CQA speedup if no inter-iteration dependency | NA |
CQA speedup if next bottleneck killed | 1.07 |
Bottlenecks | micro-operation queue, |
Function | int assignInteractionsForAtom |
Source | localtopology.cpp:506-509,localtopology.cpp:528-531,ga2la.h:114-114 |
Source loop unroll info | not unrolled or unrolled with no peel/tail loop |
Source loop unroll confidence level | max |
Unroll/vectorization loop type | NA |
Unroll factor | NA |
CQA cycles | 6.17 |
CQA cycles if no scalar integer | 1.83 |
CQA cycles if FP arith vectorized | 6.17 |
CQA cycles if fully vectorized | 0.65 |
Front-end cycles | 6.17 |
P0 cycles | 5.75 |
P1 cycles | 5.75 |
P2 cycles | 5.75 |
P3 cycles | 5.75 |
P4 cycles | 2.00 |
P5 cycles | 3.33 |
P6 cycles | 3.33 |
P7 cycles | 3.33 |
P8 cycles | 0.50 |
P9 cycles | 1.17 |
P10 cycles | 1.33 |
P11 cycles | 1.00 |
P12 cycles | 1.50 |
P13 cycles | 1.50 |
DIV/SQRT cycles | 0.00 |
Inter-iter dependencies cycles | 1 |
FE+BE cycles (UFS) | NA |
Stall cycles (UFS) | NA |
Nb insns | 38.00 |
Nb uops | 37.00 |
Nb loads | 9.00 |
Nb stores | 1.00 |
Nb stack references | 5.00 |
FLOP/cycle | 0.00 |
Nb FLOP add-sub | 0.00 |
Nb FLOP mul | 0.00 |
Nb FLOP fma | 0.00 |
Nb FLOP div | 0.00 |
Nb FLOP rcp | 0.00 |
Nb FLOP sqrt | 0.00 |
Nb FLOP rsqrt | 0.00 |
Bytes/cycle | 9.73 |
Bytes prefetched | 0.00 |
Bytes loaded | 56.00 |
Bytes stored | 4.00 |
Stride 0 | 1.00 |
Stride 1 | 2.00 |
Stride n | 1.00 |
Stride unknown | 0.00 |
Stride indirect | 1.00 |
Vectorization ratio all | 14.29 |
Vectorization ratio load | 50.00 |
Vectorization ratio store | 0.00 |
Vectorization ratio mul | NA |
Vectorization ratio add_sub | NA |
Vectorization ratio fma | NA |
Vectorization ratio div_sqrt | NA |
Vectorization ratio other | 15.38 |
Vector-efficiency ratio all | 9.38 |
Vector-efficiency ratio load | 15.63 |
Vector-efficiency ratio store | 6.25 |
Vector-efficiency ratio mul | NA |
Vector-efficiency ratio add_sub | NA |
Vector-efficiency ratio fma | NA |
Vector-efficiency ratio div_sqrt | NA |
Vector-efficiency ratio other | 9.62 |
Path / |
Function | int assignInteractionsForAtom |
Source file and lines | localtopology.cpp:506-531 |
Module | libgromacs_mpi.so.9.0.0 |
nb instructions | 38 |
nb uops | 37 |
loop length | 173 |
used x86 registers | 15 |
used mmx registers | 0 |
used xmm registers | 1 |
used ymm registers | 0 |
used zmm registers | 0 |
nb stack references | 5 |
micro-operation queue | 6.17 cycles |
front end | 6.17 cycles |
ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
uops | 5.75 | 5.75 | 5.75 | 5.75 | 2.00 | 3.33 | 3.33 | 3.33 | 0.50 | 1.17 | 1.33 | 1.00 | 1.50 | 1.50 |
cycles | 5.75 | 5.75 | 5.75 | 5.75 | 2.00 | 3.33 | 3.33 | 3.33 | 0.50 | 1.17 | 1.33 | 1.00 | 1.50 | 1.50 |
Cycles executing div or sqrt instructions | NA |
Longest recurrence chain latency (RecMII) | 1.00 |
Front-end | 6.17 |
Dispatch | 5.75 |
Data deps. | 1.00 |
Overall L1 | 6.17 |
all | 14% |
load | 50% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 15% |
all | 9% |
load | 15% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 9% |
Instruction | Nb FU | ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | Latency | Recip. throughput | Vectorization |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MOV (%RDX,%RDI,4),%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
ADD -0x58(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
SUB -0x90(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
MOVSXD %ESI,%R12 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOVSXD 0x4(%R8,%R12,8),%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
CMP $-0x1,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | scal (12.5%) |
JE 6aefba <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x5fa> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
CMP -0x8c(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | scal (6.3%) |
JGE 6aefba <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x5fa> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
MOV (%R8,%R12,8),%R12D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
MOV %R12D,-0xb0(%RBP,%RDI,4) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
LEA (%RSI,%RSI,2),%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOV -0xf8(%RBP),%R12 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
VPSHUFD $-0x5c,(%R12,%RSI,4),%XMM0 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 1 | 0.50 | vect (25.0%) |
VPTESTNMD %XMM0,%XMM0,%K0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 0 | 0 | 3 | 0.50 | vect (25.0%) |
KSHIFTRB $0x2,%K0,%K1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 1 | 0.50 | N/A |
KSHIFTRB $0x1,%K0,%K2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 1 | 0.50 | N/A |
KMOVD %K0,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
KMOVD %K2,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
CMOVNE %EDI,%EAX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%ECX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R9D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
KMOVD %K1,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
CMOVNE %EDI,%EBX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%R15D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R11D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMOVNE %EDI,%R14D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%R13D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R10D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
MOV -0xd0(%RBP),%RSI | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
ADD %RDI,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
INC %RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
INC %RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP $0x1,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
JNE 6aec80 <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x2c0> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
Function | int assignInteractionsForAtom |
Source file and lines | localtopology.cpp:506-531 |
Module | libgromacs_mpi.so.9.0.0 |
nb instructions | 38 |
nb uops | 37 |
loop length | 173 |
used x86 registers | 15 |
used mmx registers | 0 |
used xmm registers | 1 |
used ymm registers | 0 |
used zmm registers | 0 |
nb stack references | 5 |
micro-operation queue | 6.17 cycles |
front end | 6.17 cycles |
ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
uops | 5.75 | 5.75 | 5.75 | 5.75 | 2.00 | 3.33 | 3.33 | 3.33 | 0.50 | 1.17 | 1.33 | 1.00 | 1.50 | 1.50 |
cycles | 5.75 | 5.75 | 5.75 | 5.75 | 2.00 | 3.33 | 3.33 | 3.33 | 0.50 | 1.17 | 1.33 | 1.00 | 1.50 | 1.50 |
Cycles executing div or sqrt instructions | NA |
Longest recurrence chain latency (RecMII) | 1.00 |
Front-end | 6.17 |
Dispatch | 5.75 |
Data deps. | 1.00 |
Overall L1 | 6.17 |
all | 14% |
load | 50% |
store | 0% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 15% |
all | 9% |
load | 15% |
store | 6% |
mul | NA (no mul vectorizable/vectorized instructions) |
add-sub | NA (no add-sub vectorizable/vectorized instructions) |
fma | NA (no fma vectorizable/vectorized instructions) |
div/sqrt | NA (no div/sqrt vectorizable/vectorized instructions) |
other | 9% |
Instruction | Nb FU | ALU0/BRU0 | ALU1 | ALU2 | ALU3 | BRU1 | AGU0 | AGU1 | AGU2 | FP0 | FP1 | FP2 | FP3 | FP4 | FP5 | Latency | Recip. throughput | Vectorization |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MOV (%RDX,%RDI,4),%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
ADD -0x58(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
SUB -0x90(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
MOVSXD %ESI,%R12 | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOVSXD 0x4(%R8,%R12,8),%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | N/A |
CMP $-0x1,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | scal (12.5%) |
JE 6aefba <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x5fa> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
CMP -0x8c(%RBP),%ESI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.33 | scal (6.3%) |
JGE 6aefba <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x5fa> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
MOV (%R8,%R12,8),%R12D | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
MOV %R12D,-0xb0(%RBP,%RDI,4) | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0.50 | scal (6.3%) |
LEA (%RSI,%RSI,2),%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
MOV -0xf8(%RBP),%R12 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
VPSHUFD $-0x5c,(%R12,%RSI,4),%XMM0 | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 1 | 0.50 | vect (25.0%) |
VPTESTNMD %XMM0,%XMM0,%K0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 0 | 0 | 3 | 0.50 | vect (25.0%) |
KSHIFTRB $0x2,%K0,%K1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 1 | 0.50 | N/A |
KSHIFTRB $0x1,%K0,%K2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 0 | 0 | 1 | 0.50 | N/A |
KMOVD %K0,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
KMOVD %K2,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
CMOVNE %EDI,%EAX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%ECX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R9D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
KMOVD %K1,%ESI | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.50 | 0.50 | 4 | 1 | N/A |
CMOVNE %EDI,%EBX | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%R15D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R11D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
TEST $0x1,%SIL | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMOVNE %EDI,%R14D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVE %EDI,%R13D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
CMOVNE %EDI,%R10D | 1 | 0.50 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50 | scal (6.3%) |
MOV -0xd0(%RBP),%RSI | 1 | 0 | 0 | 0 | 0 | 0 | 0.33 | 0.33 | 0.33 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0.33 | N/A |
ADD %RDI,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
INC %RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
INC %RDI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
CMP $0x1,%RSI | 1 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.25 | N/A |
JNE 6aec80 <_ZL25assignInteractionsForAtomILb0EEiRK12AtomIndexSetRK15reverse_ilist_tRK11gmx_ga2la_tRK18gmx_domdec_zones_tbPKibfPK5t_pbcN3gmx8ArrayRefIKNSH_11BasicVectorIfEEEEP22InteractionDefinitionsiNSH_16DDBondedCheckingE+0x2c0> | 1 | 0.50 | 0 | 0 | 0 | 0.50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.50-1 | N/A |
Run 1x1 | Number processes: 1Number processes per node: 1OMP_NUM_THREADS: 1 |
---|---|
Run 2x1 | Number processes: 2Number processes per node: 2OMP_NUM_THREADS: 1 |
Run 4x1 | Number processes: 4Number processes per node: 4OMP_NUM_THREADS: 1 |
Run 8x1 | Number processes: 8Number processes per node: 8OMP_NUM_THREADS: 1 |
Run 16x1 | Number processes: 16Number processes per node: 16OMP_NUM_THREADS: 1 |
Run 32x1 | Number processes: 32Number processes per node: 32OMP_NUM_THREADS: 1 |
Run 64x1 | Number processes: 64Number processes per node: 64OMP_NUM_THREADS: 1 |
Run 128x1 | Number processes: 128Number processes per node: 128OMP_NUM_THREADS: 1 |
Run 192x1 | Number processes: 192Number nodes: 1Number processes per node: 192Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 -pin on -deffnm aoccMPI Command: mpirun -genv I_MPI_FABRICS=shm -n <number_processes>Dataset: Run Directory: .OMP_NUM_THREADS: 1 |
(1x1) Efficiency | (1x1) Potential Speed-Up (%) | (2x1) Efficiency | (2x1) Potential Speed-Up (%) | (4x1) Efficiency | (4x1) Potential Speed-Up (%) | (8x1) Efficiency | (8x1) Potential Speed-Up (%) | (16x1) Efficiency | (16x1) Potential Speed-Up (%) | (32x1) Efficiency | (32x1) Potential Speed-Up (%) | (64x1) Efficiency | (64x1) Potential Speed-Up (%) | (128x1) Efficiency | (128x1) Potential Speed-Up (%) | (192x1) Efficiency | (192x1) Potential Speed-Up (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
Run | Number of threads | Efficiency (ideal is 1) | Speedup | Ideal Speedup | Time (s) | Coverage (%) |
---|---|---|---|---|---|---|
1x1 | ||||||
2x1 | 2 | 1 | 1 | 2 | 0.17499996721745 | 0.035299114882946 |
4x1 | 4 | 1 | 1 | 4 | 0.12999999523163 | 0.037653557956219 |
8x1 | 8 | 1 | 1 | 8 | 0.10500001162291 | 0.046067304909229 |
16x1 | 15 | 1 | 1 | 16 | 0.074999988079071 | 0.044785194098949 |
32x1 | ||||||
64x1 | ||||||
128x1 | ||||||
192x1 |