Loop id | Source Location | Source Function | Level | Coverage 1x1 (%) | Coverage 1x2 (%) | Coverage 1x4 (%) | Coverage 1x8 (%) | Coverage 1x16 (%) | Coverage 1x32 (%) | Coverage 1x64 (%) | Coverage 1x128 (%) | Max Time Over Threads 1x1 (s) | Max Time Over Threads 1x2 (s) | Max Time Over Threads 1x4 (s) | Max Time Over Threads 1x8 (s) | Max Time Over Threads 1x16 (s) | Max Time Over Threads 1x32 (s) | Max Time Over Threads 1x64 (s) | Max Time Over Threads 1x128 (s) | Time w.r.t. Wall Time 1x1 (s) | Time w.r.t. Wall Time 1x2 (s) | Time w.r.t. Wall Time 1x4 (s) | Time w.r.t. Wall Time 1x8 (s) | Time w.r.t. Wall Time 1x16 (s) | Time w.r.t. Wall Time 1x32 (s) | Time w.r.t. Wall Time 1x64 (s) | Time w.r.t. Wall Time 1x128 (s) | Nb Threads 1x1 | Nb Threads 1x2 | Nb Threads 1x4 | Nb Threads 1x8 | Nb Threads 1x16 | Nb Threads 1x32 | Nb Threads 1x64 | Nb Threads 1x128 | Vectorization Ratio (%) | Vector Length Use (%) | Speedup If No Scalar Integer | Speedup If FP Vectorized | Speedup If Fully Vectorized | Speedup If Perfect Load Balancing 1x1 | Speedup If Perfect Load Balancing 1x2 | Speedup If Perfect Load Balancing 1x4 | Speedup If Perfect Load Balancing 1x8 | Speedup If Perfect Load Balancing 1x16 | Speedup If Perfect Load Balancing 1x32 | Speedup If Perfect Load Balancing 1x64 | Speedup If Perfect Load Balancing 1x128 | Stride 0 | Stride 1 | Stride n | Stride Unknown | Stride Indirect | (1x1) Efficiency | (1x1) Potential Speed-Up (%) | (1x2) Efficiency | (1x2) Potential Speed-Up (%) | (1x4) Efficiency | (1x4) Potential Speed-Up (%) | (1x8) Efficiency | (1x8) Potential Speed-Up (%) | (1x16) Efficiency | (1x16) Potential Speed-Up (%) | (1x32) Efficiency | (1x32) Potential Speed-Up (%) | (1x64) Efficiency | (1x64) Potential Speed-Up (%) | (1x128) Efficiency | (1x128) Potential Speed-Up (%) |
---|
605 | libgromacs.so.8 - kernel_outer.h:431-431 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 38.33 | 35.87 | 34.18 | 32.11 | 27.86 | 23.75 | 16.21 | 6.37 | 100.58 | 55.01 | 31.76 | 16.09 | 7.78 | 3.96 | 2.11 | 1.21 | 100.58 | 50.38 | 25.23 | 12.87 | 6.39 | 3.28 | 1.7 | 0.86 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 80.72 | 83.18 | 1 | 1 | 1 | 1 | 1.09 | 1.27 | 1.27 | 1.26 | 1.27 | 1.33 | 1.48 | 2 | 0 | 1 | 2 | 5 | 1 | 0 | 1 | 0.06 | 1 | 0.12 | 0.98 | 0.74 | 0.98 | 0.45 | 0.96 | 0.99 | 0.92 | 1.22 | 0.91 | 0.55 |
603 | libgromacs.so.8 - kernel_outer.h:452-452 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 15.72 | 14.29 | 13.91 | 12.81 | 11.51 | 9.49 | 6.42 | 2.55 | 41.24 | 26.92 | 15.38 | 8.12 | 4.37 | 2.43 | 1.64 | 0.93 | 41.24 | 20.07 | 10.27 | 5.14 | 2.64 | 1.31 | 0.67 | 0.34 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 82.47 | 84.7 | 1 | 1 | 1 | 1 | 1.34 | 1.51 | 1.61 | 1.71 | 1.96 | 2.6 | 2.82 | 2 | 0 | 1 | 2 | 5 | 1 | 0 | 1.03 | 0 | 1 | 0 | 1 | 0 | 0.98 | 0.27 | 0.98 | 0.15 | 0.96 | 0.25 | 0.95 | 0.13 |
612 | libgromacs.so.8 - kernel_outer.h:431-431 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 5.88 | 5.29 | 5.02 | 4.67 | 4.14 | 3.6 | 2.45 | 0.98 | 15.44 | 8.09 | 4.66 | 2.45 | 1.2 | 0.62 | 0.34 | 0.22 | 15.44 | 7.42 | 3.7 | 1.87 | 0.95 | 0.5 | 0.26 | 0.13 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 84.2 | 86.21 | 1 | 1 | 1 | 1 | 1.09 | 1.27 | 1.33 | 1.3 | 1.32 | 1.42 | 1.69 | 2 | 0 | 1 | 3 | 4 | 1 | 0 | 1.04 | 0 | 1.04 | 0 | 1.03 | 0 | 1.02 | 0 | 0.96 | 0.13 | 0.93 | 0.18 | 0.93 | 0.07 |
16294 | libgromacs.so.8 - pme_spread.cpp:358-400 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | InBetween | 2.65 | 2.14 | 2.17 | 2.08 | 1.96 | 1.34 | 1.03 | 0.66 | 6.94 | 3.58 | 1.88 | 1.3 | 0.65 | 0.24 | 0.15 | 0.17 | 6.94 | 3 | 1.6 | 0.83 | 0.45 | 0.18 | 0.11 | 0.09 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 127 | 59.09 | 36.51 | 1.88 | 1.67 | 3.9 | 1 | 1.2 | 1.18 | 1.59 | 1.48 | 1.33 | 1.5 | 1.89 | NA | NA | NA | NA | NA | 1 | 0 | 1.16 | 0 | 1.08 | 0 | 1.05 | 0 | 0.96 | 0.07 | 1.2 | 0 | 0.99 | 0.01 | 0.6 | 0.26 |
610 | libgromacs.so.8 - kernel_outer.h:452-452 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 2.33 | 2.16 | 2.11 | 2.04 | 1.79 | 1.46 | 1.01 | 0.41 | 6.12 | 4.05 | 2.37 | 1.31 | 0.69 | 0.38 | 0.28 | 0.16 | 6.12 | 3.04 | 1.56 | 0.82 | 0.41 | 0.2 | 0.11 | 0.05 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 127 | 87.33 | 88.91 | 1 | 1 | 1 | 1 | 1.34 | 1.53 | 1.64 | 1.72 | 2 | 2.8 | 3.2 | 3 | 0 | 1 | 4 | 4 | 1 | 0 | 1.01 | 0 | 0.98 | 0.04 | 0.93 | 0.14 | 0.93 | 0.12 | 0.96 | 0.06 | 0.87 | 0.13 | 0.96 | 0.02 |
606 | libgromacs.so.8 - impl_x86_avx_256_simd_float.h:96-406 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.87 | 1.61 | 1.63 | 1.46 | 1.35 | 1.17 | 0.69 | 0.27 | 4.91 | 2.34 | 1.54 | 0.73 | 0.47 | 0.25 | 0.11 | 0.09 | 4.91 | 2.26 | 1.2 | 0.58 | 0.31 | 0.16 | 0.07 | 0.04 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 85.31 | 87.04 | 1 | 1 | 1 | 1 | 1.04 | 1.29 | 1.28 | 1.57 | 1.67 | 1.57 | 3 | 2 | 1 | 1 | 9 | 1 | 1 | 0 | 1.09 | 0 | 1.02 | 0 | 1.06 | 0 | 0.99 | 0.01 | 0.96 | 0.05 | 1.1 | 0 | 0.96 | 0.01 |
16008 | libgromacs.so.8 - pme_gather.cpp:156-156 [...] | gather_f_bsplines(gmx_pme_t const*, float const*, bool, PmeAtomComm const*, splinedata_t const*, float) | Innermost | 1.86 | 2.27 | 2.17 | 2.04 | 1.57 | 1.32 | 1.36 | 1.32 | 4.88 | 3.73 | 1.74 | 1 | 0.48 | 0.26 | 0.21 | 0.28 | 4.88 | 3.19 | 1.6 | 0.82 | 0.36 | 0.18 | 0.14 | 0.18 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 127 | 90.91 | 82.95 | 1 | 1 | 1.06 | 1 | 1.17 | 1.09 | 1.25 | 1.37 | 1.53 | 1.62 | 1.65 | 0 | 2 | 0 | 3 | 0 | 1 | 0 | 0.76 | 0.53 | 0.76 | 0.52 | 0.74 | 0.52 | 0.85 | 0.24 | 0.85 | 0.2 | 0.54 | 0.62 | 0.21 | 1.04 |
16009 | libgromacs.so.8 - pme_gather.cpp:94-348 [...] | gather_f_bsplines(gmx_pme_t const*, float const*, bool, PmeAtomComm const*, splinedata_t const*, float) | Outermost | 1.71 | 1.67 | 1.68 | 1.69 | 1.39 | 1.25 | 0.87 | 0.52 | 4.5 | 2.59 | 1.56 | 0.81 | 0.4 | 0.23 | 0.14 | 0.15 | 4.5 | 2.34 | 1.24 | 0.68 | 0.32 | 0.17 | 0.09 | 0.07 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 125 | 48.82 | 30.54 | 1.87 | 1.74 | 7.07 | 1 | 1.11 | 1.27 | 1.21 | 1.29 | 1.44 | 1.56 | 2.14 | NA | NA | NA | NA | NA | 1 | 0 | 0.96 | 0.06 | 0.91 | 0.16 | 0.83 | 0.29 | 0.88 | 0.17 | 0.83 | 0.22 | 0.78 | 0.19 | 0.5 | 0.26 |
604 | libgromacs.so.8 - impl_x86_avx_256_simd_float.h:96-406 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.43 | 1.44 | 1.29 | 1.25 | 1.07 | 0.91 | 0.58 | 0.21 | 3.75 | 2.61 | 1.45 | 0.89 | 0.43 | 0.26 | 0.17 | 0.1 | 3.75 | 2.02 | 0.95 | 0.5 | 0.25 | 0.13 | 0.06 | 0.03 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 120 | 86.03 | 87.68 | 1 | 1 | 1 | 1 | 1.29 | 1.53 | 1.82 | 1.79 | 2.17 | 2.83 | 3.33 | 2 | 1 | 1 | 9 | 1 | 1 | 0 | 0.93 | 0.1 | 0.99 | 0.02 | 0.94 | 0.08 | 0.94 | 0.07 | 0.9 | 0.09 | 0.98 | 0.01 | 0.98 | 0 |
16301 | libgromacs.so.8 - pme_spread.cpp:277-975 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | InBetween | 1.42 | 1.38 | 1.38 | 1.98 | 1.54 | 1.16 | 0.85 | 0.43 | 3.73 | 2.25 | 1.19 | 0.94 | 0.47 | 0.22 | 0.14 | 0.13 | 3.73 | 1.94 | 1.02 | 0.79 | 0.35 | 0.16 | 0.09 | 0.06 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 45.49 | 31.3 | 1 | 1.77 | 2.65 | 1 | 1.16 | 1.18 | 1.21 | 1.38 | 1.47 | 1.75 | 2.6 | NA | NA | NA | NA | NA | 1 | 0 | 0.96 | 0.05 | 0.91 | 0.12 | 0.59 | 0.81 | 0.67 | 0.51 | 0.73 | 0.31 | 0.65 | 0.3 | 0.49 | 0.22 |
16378 | libgromacs.so.8 - fft5d.cpp:853-855 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 1.41 | 2.74 | 3.6 | 3.43 | 4.22 | 6.89 | 6 | 6.99 | 3.69 | 3.87 | 2.73 | 1.55 | 1.07 | 1.01 | 0.79 | 1.51 | 3.69 | 3.85 | 2.66 | 1.37 | 0.97 | 0.95 | 0.63 | 0.95 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 0 | 25 | 1 | 1.09 | 4.36 | 1 | 1.01 | 1.03 | 1.15 | 1.14 | 1.12 | 1.34 | 1.68 | 1 | 0 | 0 | 4 | 0 | 1 | 0 | 0.48 | 1.43 | 0.35 | 2.35 | 0.34 | 2.28 | 0.24 | 3.22 | 0.12 | 6.05 | 0.09 | 5.45 | 0.03 | 6.78 |
600 | libgromacs.so.8 - kernel_outer.h:206-496 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Outermost | 1.21 | 1.16 | 1.06 | 1.01 | 0.88 | 0.68 | 0.46 | 0.17 | 3.17 | 1.68 | 0.95 | 0.66 | 0.32 | 0.15 | 0.12 | 0.06 | 3.17 | 1.62 | 0.78 | 0.4 | 0.2 | 0.09 | 0.05 | 0.02 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 127 | 68 | 57.35 | 1.03 | 1.48 | 1.98 | 1 | 1.04 | 1.22 | 1.65 | 1.6 | 1.67 | 3 | 3 | NA | NA | NA | NA | NA | 1 | 0 | 0.98 | 0.03 | 1.02 | 0 | 0.99 | 0.01 | 0.99 | 0.01 | 1.1 | 0 | 0.99 | 0 | 1.24 | 0 |
1133 | libgromacs.so.8 - kernel_prune.cpp:115-167 [...] | nbnxn_kernel_prune_4xn(NbnxnPairlistCpu*, nbnxn_atomdata_t const*, gmx::ArrayRef<gmx::BasicVector<float> const>, float) | Innermost | 1.01 | 0.94 | 0.95 | 0.8 | 1.04 | 0.69 | 0.44 | 0.27 | 2.65 | 1.36 | 0.71 | 0.36 | 0.31 | 0.12 | 0.07 | 0.07 | 2.64 | 1.32 | 0.7 | 0.32 | 0.24 | 0.09 | 0.05 | 0.04 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 88.64 | 90.34 | 1.08 | 1 | 1.08 | 1 | 1.04 | 1.03 | 1.13 | 1.35 | 1.33 | 1.75 | 2.33 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0.94 | 0.05 | 1.03 | 0 | 0.69 | 0.32 | 0.92 | 0.06 | 0.82 | 0.08 | 0.52 | 0.13 |
601 | libgromacs.so.8 - kernel_outer.h:473-473 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 1.01 | 1 | 0.85 | 0.81 | 0.76 | 0.65 | 0.43 | 0.18 | 2.66 | 1.73 | 0.74 | 0.43 | 0.27 | 0.18 | 0.09 | 0.07 | 2.66 | 1.4 | 0.63 | 0.32 | 0.17 | 0.09 | 0.04 | 0.02 | 1 | 2 | 4 | 8 | 16 | 32 | 58 | 105 | 96.92 | 97.39 | 1 | 1 | 1 | 1 | 1.24 | 1.17 | 1.34 | 1.59 | 2 | 1.8 | 2.33 | 2 | 0 | 1 | 4 | 2 | 1 | 0 | 0.95 | 0.05 | 1.06 | 0 | 1.04 | 0 | 0.98 | 0.02 | 0.92 | 0.05 | 1.04 | 0 | 1.04 | 0 |
14469 | libgromacs.so.8 - settle.cpp:425-425 [...] | void gmx::settleTemplateWrapper<gmx::SimdFloat, gmx::SimdFBool, 8, float const*>(gmx::SettleData const&, int, int, float const*, float const*, float*, float, float*, bool, float (*) [3], bool*) | Single | 0.83 | 0.66 | 0.71 | 0.72 | 0.8 | 0.75 | 0.7 | 0.81 | 2.17 | 0.95 | 0.68 | 0.34 | 0.26 | 0.15 | 0.12 | 0.2 | 2.17 | 0.92 | 0.52 | 0.29 | 0.18 | 0.1 | 0.07 | 0.11 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 96.57 | 81.42 | 1.11 | 1 | 1.16 | 1 | 1.03 | 1.31 | 1.17 | 1.44 | 1.5 | 1.71 | 2 | 2 | 0 | 0 | 45 | 1 | 1 | 0 | 1.18 | 0 | 1.04 | 0 | 0.94 | 0.05 | 0.75 | 0.2 | 0.68 | 0.24 | 0.48 | 0.36 | 0.15 | 0.69 |
14197 | libgromacs.so.8 - lincs.cpp:278-295 [...] | gmx::lincs_matrix_expand(gmx::Lincs const&, (anonymous namespace)::Task const&, gmx::ArrayRef<float const>, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gmx::ArrayRef<float>) | InBetween | 0.77 | 0.7 | 0.61 | 0.54 | 0.62 | 0.63 | 0.71 | 0.64 | 2.01 | 1.02 | 0.51 | 0.24 | 0.26 | 0.17 | 0.15 | 0.19 | 2.01 | 0.98 | 0.45 | 0.22 | 0.14 | 0.09 | 0.08 | 0.09 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 22.94 | 24.82 | 1.9 | 2.53 | 6.45 | 1 | 1.04 | 1.16 | 1.14 | 1.86 | 2.13 | 2.14 | 2.38 | 1 | 0.5 | 0.5 | 4 | 2 | 1 | 0 | 1.03 | 0 | 1.12 | 0 | 1.14 | 0 | 0.9 | 0.06 | 0.7 | 0.19 | 0.39 | 0.43 | 0.17 | 0.53 |
3497 | libgromacs.so.8 - pairlist_simd_4xm.h:136-193 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.76 | 0.66 | 0.71 | 0.65 | 0.63 | 0.5 | 0.34 | 0.11 | 2 | 0.94 | 0.55 | 0.28 | 0.19 | 0.11 | 0.06 | 0.03 | 2 | 0.92 | 0.52 | 0.26 | 0.14 | 0.07 | 0.04 | 0.02 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 116 | 73.85 | 58.24 | 1.25 | 1.19 | 1.42 | 1 | 1.02 | 1.06 | 1.12 | 1.36 | 1.57 | 2 | 1.5 | 2.5 | 0 | 1 | 0.5 | 0 | 1 | 0 | 1.09 | 0 | 0.96 | 0.03 | 0.96 | 0.03 | 0.89 | 0.07 | 0.89 | 0.05 | 0.78 | 0.07 | 0.78 | 0.02 |
15641 | libgromacs.so.8 - bonded.cpp:1151-1170 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*... | Single | 0.67 | 0.62 | 0.59 | 0.57 | 0.6 | 0.54 | 0.49 | 0.43 | 1.76 | 0.87 | 0.54 | 0.3 | 0.24 | 0.13 | 0.1 | 0.11 | 1.76 | 0.86 | 0.43 | 0.23 | 0.14 | 0.07 | 0.05 | 0.06 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 73.84 | 59.89 | 1.28 | 1.01 | 1.36 | 1 | 1.01 | 1.26 | 1.3 | 1.85 | 1.86 | 2 | 2.2 | NA | NA | NA | NA | NA | 1 | 0 | 1.02 | 0 | 1.02 | 0 | 0.96 | 0.02 | 0.79 | 0.13 | 0.79 | 0.12 | 0.55 | 0.22 | 0.23 | 0.33 |
16371 | libgromacs.so.8 - fft5d.cpp:916-918 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.64 | 0.56 | 0.79 | 0.84 | 0.77 | 0.41 | 0.6 | 0.54 | 1.69 | 0.82 | 0.67 | 0.4 | 0.23 | 0.09 | 0.12 | 0.25 | 1.69 | 0.79 | 0.58 | 0.34 | 0.18 | 0.06 | 0.06 | 0.07 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 0 | 25 | 1.21 | 1 | 4 | 1 | 1.04 | 1.16 | 1.21 | 1.35 | 1.8 | 2 | 3.57 | 0 | 1 | 0 | 4 | 0 | 1 | 0 | 1.07 | 0 | 0.73 | 0.21 | 0.62 | 0.32 | 0.59 | 0.32 | 0.88 | 0.05 | 0.44 | 0.34 | 0.19 | 0.44 |
16319 | libgromacs.so.8 - pme_spread.cpp:104-133 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.18] | Innermost | 0.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.57 | | | | | | | | 1.57 | | | | | | | | 1 | | | | | | | | 18.75 | 19.53 | 1.05 | 1.52 | 3.67 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 5 | 1 | 0 | | | | | | | | | | | | | | |
15873 | libgromacs.so.8 - pairs.cpp:863-884 [...] | void do_pairs_simple<gmx::SimdFloat, 8, float const*>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float const*, gmx::ArrayRef<float const>, float) | Single | 0.58 | 0.57 | 0.5 | 0.49 | 0.43 | 0.32 | 0.21 | 0.08 | 1.53 | 0.86 | 0.42 | 0.27 | 0.13 | 0.07 | 0.06 | 0.03 | 1.53 | 0.79 | 0.37 | 0.2 | 0.1 | 0.04 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 63 | 111 | 66.81 | 49.79 | 1.68 | 1.02 | 1.31 | 1 | 1.09 | 1.14 | 1.42 | 1.3 | 1.75 | 3 | 3 | NA | NA | NA | NA | NA | 1 | 0 | 0.97 | 0.02 | 1.03 | 0 | 0.96 | 0.02 | 0.96 | 0.02 | 1.2 | 0 | 1.2 | 0 | 1.2 | 0 |
14198 | libgromacs.so.8 - lincs.cpp:290-292 | gmx::lincs_matrix_expand(gmx::Lincs const&, (anonymous namespace)::Task const&, gmx::ArrayRef<float const>, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gmx::ArrayRef<float>) | Innermost | 0.54 | 0.49 | 0.43 | 0.39 | 0.43 | 0.39 | 0.36 | 0.46 | 1.42 | 0.71 | 0.34 | 0.23 | 0.13 | 0.09 | 0.06 | 0.16 | 1.42 | 0.69 | 0.32 | 0.16 | 0.1 | 0.05 | 0.04 | 0.06 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 0 | 12.5 | 1 | 2.91 | 8 | 1 | 1.03 | 1.06 | 1.53 | 1.44 | 1.8 | 1.5 | 2.67 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 1.03 | 0 | 1.11 | 0 | 1.11 | 0 | 0.89 | 0.05 | 0.89 | 0.04 | 0.55 | 0.16 | 0.18 | 0.37 |
3490 | libgromacs.so.8 - pairlist_simd_4xm.h:136-273 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | InBetween | 0.5 | 0.47 | 0.42 | 0.38 | 0.34 | 0.32 | 0.19 | 0.07 | 1.3 | 0.68 | 0.36 | 0.18 | 0.11 | 0.08 | 0.04 | 0.03 | 1.3 | 0.66 | 0.31 | 0.15 | 0.08 | 0.04 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 63 | 111 | 13.48 | 19.98 | 2.82 | 2.77 | 11.55 | 1 | 1.03 | 1.16 | 1.2 | 1.57 | 2 | 2 | 3 | NA | NA | NA | NA | NA | 1 | 0 | 0.98 | 0.01 | 1.05 | 0 | 1.08 | 0 | 1.02 | 0 | 1.02 | 0 | 1.02 | -0 | 1.02 | -0 |
14201 | libgromacs.so.8 - lincs.cpp:376-391 [...] | gmx::lincs_update_atoms(gmx::Lincs*, int, float, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<float const>, float (*) [3]) | Single | 0.46 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.21 | | | | | | | | 1.21 | | | | | | | | 1 | | | | | | | | 27.78 | 22.22 | 1 | 1.17 | 5.17 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 1 | 1 | 0 | | | | | | | | | | | | | | |
15650 | libgromacs.so.8 - bonded.cpp:2066-2126 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::pdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*,... | Single | 0.42 | 0.37 | 0.38 | 0.33 | 0.28 | 0.25 | 0.16 | 0.06 | 1.11 | 0.54 | 0.29 | 0.17 | 0.08 | 0.06 | 0.04 | 0.02 | 1.11 | 0.52 | 0.28 | 0.13 | 0.06 | 0.03 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 61 | 97 | 47.25 | 47.02 | 1.29 | 1 | 1.45 | 1 | 1.04 | 1.07 | 1.31 | 1.33 | 2 | 2 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 1.07 | 0 | 0.99 | 0 | 1.07 | 0 | 1.16 | 0 | 1.16 | 0 | 0.87 | 0.02 | 0.87 | 0.01 |
14189 | libgromacs.so.8 - lincs.cpp:845-857 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Single | 0.42 | 0.36 | 0.43 | 0.4 | 0.39 | 0.29 | 0.26 | 0.15 | 1.1 | 0.5 | 0.37 | 0.21 | 0.14 | 0.06 | 0.04 | 0.06 | 1.1 | 0.5 | 0.32 | 0.16 | 0.09 | 0.04 | 0.03 | 0.02 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 124 | 90.32 | 68.39 | 1.2 | 1 | 1.28 | 1 | 1 | 1.16 | 1.31 | 1.56 | 1.5 | 1.33 | 3 | 2 | 2 | 1 | 13 | 1 | 1 | 0 | 1.1 | 0 | 0.86 | 0.06 | 0.86 | 0.06 | 0.76 | 0.09 | 0.86 | 0.04 | 0.57 | 0.11 | 0.43 | 0.09 |
3503 | libgromacs.so.8 - pairlist.cpp:3520-3522 | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.39 | 0.36 | 0.34 | 0.3 | 0.3 | 0.23 | 0.16 | 0.06 | 1.02 | 0.51 | 0.29 | 0.16 | 0.09 | 0.05 | 0.04 | 0.03 | 1.02 | 0.51 | 0.25 | 0.12 | 0.07 | 0.03 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 105 | 7.14 | 15.18 | 1.09 | 1.41 | 6.99 | 1 | 1 | 1.16 | 1.33 | 1.29 | 1.67 | 2 | 3 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1.02 | 0 | 1.06 | 0 | 0.91 | 0.03 | 1.06 | 0 | 0.8 | 0.03 | 0.8 | 0.01 |
14199 | libgromacs.so.8 - lincs.cpp:290-292 [...] | gmx::lincs_matrix_expand(gmx::Lincs const&, (anonymous namespace)::Task const&, gmx::ArrayRef<float const>, gmx::ArrayRef<float>, gmx::ArrayRef<float>, gmx::ArrayRef<float>) | Innermost | 0.35 | 0.36 | 0.24 | 0.25 | 0.24 | 0.23 | 0.19 | 0.28 | 0.93 | 0.55 | 0.23 | 0.14 | 0.08 | 0.08 | 0.06 | 0.1 | 0.93 | 0.51 | 0.17 | 0.1 | 0.06 | 0.03 | 0.02 | 0.04 | 1 | 2 | 4 | 8 | 16 | 32 | 56 | 109 | 38.46 | 38.46 | 1 | 1.23 | 1.68 | 1 | 1.08 | 1.35 | 1.4 | 1.6 | 2.67 | 3 | 2.5 | 0 | 2 | 0 | 0 | 4 | 1 | 0 | 0.91 | 0.03 | 1.37 | 0 | 1.16 | 0 | 0.97 | 0.01 | 0.97 | 0.01 | 0.73 | 0.05 | 0.18 | 0.23 |
14603 | libgromacs.so.8 - update.cpp:486-486 [...] | gmx::Update::Impl::update_coords(t_inputrec const&, long, int, bool, gmx::ArrayRef<ParticleType const>, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, t_state*, gmx::ArrayRefWithPadding<gmx::BasicVe... | Single | 0.33 | 0.34 | 0.42 | 0.76 | 0.43 | 0.42 | 0.37 | 0.46 | 0.87 | 0.5 | 0.37 | 0.37 | 0.14 | 0.1 | 0.08 | 0.12 | 0.87 | 0.48 | 0.31 | 0.3 | 0.1 | 0.06 | 0.04 | 0.06 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 100 | 95.45 | 1 | 1 | 1.08 | 1 | 1.04 | 1.23 | 1.23 | 1.4 | 2 | 2 | 2 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 0.91 | 0.03 | 0.7 | 0.13 | 0.36 | 0.48 | 0.54 | 0.2 | 0.45 | 0.23 | 0.34 | 0.24 | 0.11 | 0.41 |
613 | libgromacs.so.8 - impl_x86_avx_256_simd_float.h:96-406 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.3 | 0.3 | 0.31 | 0.27 | 0.23 | 0.2 | 0.13 | 0.05 | 0.79 | 0.43 | 0.3 | 0.14 | 0.08 | 0.05 | 0.03 | 0.02 | 0.79 | 0.43 | 0.23 | 0.11 | 0.05 | 0.03 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 58 | 98 | 88.43 | 89.81 | 1 | 1 | 1 | 1 | 1.02 | 1.3 | 1.27 | 1.6 | 1.67 | 3 | 2 | 2 | 1 | 0 | 10 | 1 | 1 | 0 | 0.92 | 0.02 | 0.86 | 0.04 | 0.9 | 0.03 | 0.99 | 0 | 0.82 | 0.04 | 1.23 | 0 | 0.62 | 0.02 |
611 | libgromacs.so.8 - simd_diagonal_masker.h:104-169 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.27 | 0.28 | 0.23 | 0.23 | 0.23 | 0.17 | 0.14 | 0.05 | 0.72 | 0.5 | 0.22 | 0.16 | 0.11 | 0.06 | 0.05 | 0.04 | 0.72 | 0.4 | 0.17 | 0.09 | 0.05 | 0.02 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 15 | 31 | 54 | 74 | 89.48 | 90.74 | 1 | 1 | 1 | 1 | 1.28 | 1.29 | 1.78 | 2.2 | 3 | 2.5 | 4 | 2 | 1 | 0 | 12 | 0 | 1 | 0 | 0.9 | 0.03 | 1.06 | 0 | 1 | 0 | 0.9 | 0.02 | 1.13 | 0 | 0.56 | 0.06 | 0.56 | 0.02 |
1871 | libgromacs.so.8 - atomdata.cpp:226-233 | copy_rvec_to_nbat_real(int const*, int, int, float const (*) [3], int, float*, int) | Single | 0.25 | 0.24 | 0.23 | 0.23 | 0.43 | 0.56 | 0.73 | 1.04 | 0.65 | 0.48 | 0.25 | 0.16 | 0.23 | 0.18 | 0.18 | 0.34 | 0.65 | 0.34 | 0.17 | 0.09 | 0.1 | 0.08 | 0.08 | 0.14 | 1 | 2 | 3 | 6 | 11 | 22 | 44 | 87 | 0 | 12.5 | 1.06 | 1 | 8 | 1 | 1.41 | 1.09 | 1.33 | 1.64 | 1.64 | 1.8 | 1.7 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0.96 | 0.01 | 0.96 | 0.01 | 0.9 | 0.02 | 0.41 | 0.26 | 0.25 | 0.42 | 0.13 | 0.64 | 0.04 | 1 |
92 | gmx - | __intel_avx_rep_memcpy | Single | 0.24 | 0.15 | 0.2 | 0.3 | 0.18 | 0.17 | 0.66 | 0.91 | 0.64 | 0.25 | 0.18 | 0.14 | 0.07 | 0.08 | 0.13 | 0.25 | 0.64 | 0.21 | 0.15 | 0.12 | 0.04 | 0.02 | 0.07 | 0.12 | 1 | 2 | 4 | 8 | 16 | 31 | 64 | 128 | 100 | 100 | 1 | 1.5 | 1.5 | 1 | 1.19 | 1.2 | 1.17 | 1.75 | 4 | 2.17 | 2.08 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 1.52 | 0 | 1.07 | 0 | 0.67 | 0.1 | 1 | 0 | 1 | 0 | 0.14 | 0.57 | 0.04 | 0.87 |
14188 | libgromacs.so.8 - lincs.cpp:1135-1137 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Innermost | 0.24 | 0.23 | 0.21 | 0.21 | 0.24 | 0.22 | 0.17 | 0.11 | 0.64 | 0.33 | 0.19 | 0.11 | 0.09 | 0.05 | 0.05 | 0.04 | 0.63 | 0.33 | 0.16 | 0.08 | 0.06 | 0.03 | 0.02 | 0.01 | 1 | 2 | 4 | 8 | 16 | 32 | 61 | 115 | 0 | 12.5 | 1 | 1.42 | 10.22 | 1 | 1.03 | 1.19 | 1.38 | 1.8 | 1.67 | 2.5 | 2 | 1 | 3 | 0 | 1 | 0 | 1 | 0 | 0.95 | 0.01 | 0.98 | 0 | 0.98 | 0 | 0.66 | 0.08 | 0.66 | 0.08 | 0.49 | 0.09 | 0.49 | 0.06 |
16177 | libgromacs.so.8 - pme_solve.cpp:233-233 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.22 | 0.19 | 0.15 | 0.17 | 0.16 | 0.13 | 0.09 | 0.03 | 0.58 | 0.3 | 0.12 | 0.08 | 0.06 | 0.04 | 0.02 | 0.02 | 0.58 | 0.27 | 0.11 | 0.07 | 0.04 | 0.02 | 0.01 | 0 | 1 | 2 | 4 | 8 | 16 | 30 | 49 | 69 | 95.24 | 95.83 | 1 | 1 | 1 | 1 | 1.11 | 1.09 | 1.14 | 1.5 | 2 | 2 | 2 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 1.07 | 0 | 1.32 | 0 | 1.04 | 0 | 0.91 | 0.02 | 0.91 | 0.01 | 0.91 | 0.01 | 1 | 0 |
3496 | libgromacs.so.8 - pairlist_simd_4xm.h:204-260 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.2 | 0.22 | 0.18 | 0.16 | 0.14 | 0.12 | 0.12 | 0.04 | 0.53 | 0.36 | 0.14 | 0.11 | 0.05 | 0.03 | 0.02 | 0.02 | 0.53 | 0.32 | 0.13 | 0.06 | 0.03 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 30 | 57 | 90 | 76.67 | 58.91 | 1.24 | 1.18 | 1.38 | 1 | 1.16 | 1.08 | 1.83 | 1.67 | 1.5 | 2 | 2 | 2.5 | 0 | 0 | 1.5 | 0 | 1 | 0 | 0.83 | 0.04 | 1.02 | -0 | 1.1 | 0 | 1.1 | 0 | 0.83 | 0.02 | 0.83 | 0.02 | 0.41 | 0.02 |
1929 | libgromacs.so.8 - atomdata.cpp:1142-1148 [...] | reduceForces(nbnxn_atomdata_t*, gmx::AtomLocality, Nbnxm::GridSet const&, float (*) [3]) [clone .extracted] | Innermost | 0.18 | 0.23 | 0.23 | 0.27 | 0.2 | 0.14 | 0.1 | 0.05 | 0.48 | 0.32 | 0.21 | 0.14 | 0.07 | 0.04 | 0.02 | 0.02 | 0.48 | 0.32 | 0.17 | 0.11 | 0.05 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 30 | 52 | 89 | 0 | 12.5 | 1 | 1.1 | 8 | 1 | 1 | 1.24 | 1.27 | 1.75 | 2 | 2 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 0.75 | 0.06 | 0.71 | 0.07 | 0.55 | 0.12 | 0.6 | 0.08 | 0.75 | 0.04 | 0.75 | 0.03 | 0.38 | 0.03 |
607 | libgromacs.so.8 - kernel_outer.h:222-506 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Outermost | 0.15 | 0.16 | 0.16 | 0.13 | 0.12 | 0.08 | 0.07 | 0.03 | 0.39 | 0.22 | 0.16 | 0.08 | 0.05 | 0.02 | 0.02 | 0.02 | 0.39 | 0.22 | 0.12 | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 1 | 2 | 4 | 8 | 16 | 27 | 49 | 71 | 69.29 | 60.45 | 1.03 | 1.55 | 1.93 | 1 | 1 | 1.33 | 1.6 | 1.67 | 2 | 2 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 0.89 | 0.02 | 0.81 | 0.03 | 0.97 | 0 | 0.81 | 0.02 | 1.22 | 0 | 0.61 | 0.03 | 1 | 0 |
608 | libgromacs.so.8 - kernel_outer.h:473-473 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_VF_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.14 | 0.17 | 0.17 | 0.13 | 0.1 | 0.1 | 0.07 | 0.03 | 0.36 | 0.29 | 0.18 | 0.1 | 0.04 | 0.03 | 0.02 | 0.02 | 0.36 | 0.24 | 0.12 | 0.05 | 0.02 | 0.01 | 0.01 | 0 | 1 | 2 | 4 | 8 | 15 | 31 | 43 | 60 | 97.14 | 97.56 | 1 | 1 | 1 | 1 | 1.21 | 1.5 | 2 | 2 | 3 | 2 | 2 | 4 | 0 | 1 | 3 | 3 | 1 | 0 | 0.75 | 0.04 | 0.75 | 0.04 | 0.9 | 0.01 | 1.13 | 0 | 1.13 | 0 | 0.56 | 0.03 | 1 | 0 |
602 | libgromacs.so.8 - kernel_outer.h:465-468 [...] | nbnxm_kernel_ElecEw_VdwLJCombLB_F_4xm(NbnxnPairlistCpu const*, nbnxn_atomdata_t const*, interaction_const_t const*, float const (*) [3], nbnxn_atomdata_output_t*) | Innermost | 0.13 | 0.11 | 0.11 | 0.11 | 0.09 | 0.07 | 0.05 | 0.02 | 0.34 | 0.2 | 0.11 | 0.08 | 0.04 | 0.03 | 0.03 | 0.02 | 0.34 | 0.16 | 0.08 | 0.05 | 0.02 | 0.01 | 0.01 | 0 | 1 | 2 | 4 | 8 | 16 | 29 | 34 | 42 | 96.38 | 96.68 | 1 | 1 | 1 | 1 | 1.25 | 1.38 | 1.6 | 2 | 3 | 3 | 2 | 2 | 1 | 1 | 6 | 2 | 1 | 0 | 1.06 | 0 | 1.06 | 0 | 0.85 | 0.02 | 1.06 | 0 | 1.06 | -0 | 0.53 | 0.02 | 1 | 0 |
14619 | libgromacs.so.8 - update.cpp:1660-1664 [...] | gmx::Update::Impl::finish_update(t_inputrec const&, bool, int, gmx::ArrayRef<unsigned short const>, t_state*, gmx_wallcycle*, bool) [clone .extracted] | Single | 0.11 | 0.1 | 0.15 | 0.1 | 0.22 | 0.44 | 0.63 | 0.65 | 0.28 | 0.18 | 0.13 | 0.06 | 0.09 | 0.1 | 0.15 | 0.14 | 0.28 | 0.14 | 0.11 | 0.04 | 0.05 | 0.06 | 0.07 | 0.09 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 0 | 16.67 | 1 | 1 | 6.86 | 1 | 1.38 | 1.18 | 1.5 | 1.8 | 1.67 | 2.5 | 1.75 | 2 | 0 | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0.64 | 0.05 | 0.88 | 0.01 | 0.35 | 0.14 | 0.15 | 0.38 | 0.06 | 0.59 | 0.02 | 0.63 |
14258 | libgromacs.so.8 - md_support.cpp:139-157 [...] | calc_ke_part_normal(gmx::ArrayRef<gmx::BasicVector<float> const>, t_grpopts const*, t_mdatoms const*, gmx_ekindata_t*, t_nrnb*, bool) [clone .extracted] | Innermost | 0.1 | 0.09 | 0.11 | 0.07 | 0.07 | 0.06 | 0.04 | 0.04 | 0.25 | 0.13 | 0.1 | 0.05 | 0.03 | 0.02 | 0.02 | 0.02 | 0.25 | 0.13 | 0.08 | 0.03 | 0.02 | 0.01 | 0 | 0.01 | 1 | 2 | 4 | 8 | 16 | 26 | 29 | 81 | 21.05 | 27.71 | 1.18 | 1.16 | 1.85 | 1 | 1 | 1.25 | 1.67 | 1.5 | 2 | 2 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 0.96 | 0 | 0.78 | 0.02 | 1.04 | -0 | 0.78 | 0.02 | 0.78 | 0.01 | 1 | 0 | 0.2 | 0.03 |
16174 | libgromacs.so.8 - pme_solve.cpp:554-559 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.1 | 0.16 | 0.18 | 0.13 | 0.09 | 0.06 | 0.05 | 0.02 | 0.26 | 0.24 | 0.32 | 0.1 | 0.04 | 0.02 | 0.02 | 0.01 | 0.26 | 0.22 | 0.13 | 0.05 | 0.02 | 0.01 | 0.01 | 0 | 1 | 2 | 4 | 8 | 16 | 28 | 37 | 42 | 100 | 87.5 | 1 | 1 | 1 | 1 | 1.09 | 2.46 | 2 | 2 | 2 | 2 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0.59 | 0.07 | 0.5 | 0.09 | 0.65 | 0.05 | 0.81 | 0.02 | 0.81 | 0.01 | 0.41 | 0.03 | 1 | 0 |
14470 | libgromacs.so.8 - settle.cpp:425-425 [...] | void gmx::settleTemplateWrapper<gmx::SimdFloat, gmx::SimdFBool, 8, float const*>(gmx::SettleData const&, int, int, float const*, float const*, float*, float, float*, bool, float (*) [3], bool*) | Single | 0.1 | 0.08 | 0.08 | 0.08 | 0.08 | 0.08 | 0.08 | 0.1 | 0.26 | 0.14 | 0.08 | 0.06 | 0.05 | 0.03 | 0.02 | 0.03 | 0.26 | 0.11 | 0.06 | 0.03 | 0.02 | 0.01 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 28 | 53 | 113 | 97.11 | 83.83 | 1.1 | 1 | 1.14 | 1 | 1.27 | 1.33 | 2 | 2.5 | 3 | 2 | 3 | 2 | 2 | 4 | 39 | 1 | 1 | 0 | 1.18 | 0 | 1.08 | 0 | 1.08 | 0 | 0.81 | 0.01 | 0.81 | 0.01 | 0.41 | 0.05 | 0.2 | 0.08 |
3504 | libgromacs.so.8 - pairlist.cpp:3505-3507 | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.09 | 0.08 | 0.07 | 0.08 | 0.04 | 0.04 | 0.03 | 0.02 | 0.24 | 0.13 | 0.06 | 0.05 | 0.03 | 0.02 | 0.01 | 0.01 | 0.25 | 0.12 | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 13 | 19 | 29 | 45 | 0 | 12.5 | 1.11 | 1.46 | 8 | 1 | 1.08 | 1.2 | 1.67 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1.04 | -0 | 1.25 | 0 | 1.04 | -0 | 1.56 | 0 | 0.78 | 0.01 | 1 | 0 | 1 | 0 |
3486 | libgromacs.so.8 - pairlist.cpp:1330-1430 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | InBetween | 0.09 | 0.08 | 0.09 | 0.08 | 0.06 | 0.07 | 0.05 | 0.02 | 0.24 | 0.13 | 0.07 | 0.07 | 0.03 | 0.02 | 0.02 | 0.02 | 0.24 | 0.11 | 0.06 | 0.03 | 0.01 | 0.01 | 0.01 | 0 | 1 | 2 | 4 | 8 | 14 | 28 | 42 | 62 | 0 | 15.63 | 1 | 1 | 7.53 | 1 | 1.18 | 1.17 | 2.33 | 1.5 | 2 | 2 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 1.09 | 0 | 1 | 0 | 1 | 0 | 1.5 | 0 | 0.75 | 0.02 | 0.38 | 0.03 | 1 | 0 |
15696 | libgromacs.so.8 - vec.h:141-335 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type (anonymous namespace)::angles<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, flo... | Single | 0.08 | 0.1 | 0.09 | 0.1 | 0.07 | 0.05 | 0.04 | 0.02 | 0.21 | 0.17 | 0.1 | 0.07 | 0.04 | 0.03 | 0.01 | 0.01 | 0.21 | 0.15 | 0.07 | 0.04 | 0.02 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 15 | 23 | 32 | 38 | 23.9 | 20.17 | 1.33 | 1.6 | 5.25 | 1 | 1.21 | 1.43 | 1.75 | 2 | 3 | 1 | 1 | 1 | 0 | 3.5 | 1 | 2 | 1 | 0 | 0.7 | 0.03 | 0.75 | 0.02 | 0.66 | 0.03 | 0.66 | 0.02 | 0.66 | 0.02 | 1 | 0 | 1 | 0 |
4901 | libgromacs.so.8 - threaded_force_buffer.cpp:78-78 [...] | gmx::ThreadForceBuffer<float [4]>::clearForcesAndEnergies() | Single | 0.08 | 0.11 | 0.16 | 0.28 | 0.36 | 0.26 | 0.38 | 0.25 | 0.21 | 0.16 | 0.15 | 0.14 | 0.14 | 0.06 | 0.1 | 0.11 | 0.21 | 0.16 | 0.12 | 0.11 | 0.08 | 0.04 | 0.04 | 0.03 | 1 | 2 | 4 | 8 | 16 | 32 | 63 | 127 | 100 | 100 | 1 | 2 | 2 | 1 | 1 | 1.36 | 1.27 | 1.75 | 2 | 2.5 | 3.67 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0.66 | 0.04 | 0.44 | 0.09 | 0.24 | 0.21 | 0.16 | 0.3 | 0.16 | 0.22 | 0.08 | 0.35 | 0.05 | 0.24 |
16181 | libgromacs.so.8 - pme_solve.cpp:521-530 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.08 | 0.07 | 0.06 | 0.07 | 0.06 | 0.05 | 0.03 | 0.01 | 0.21 | 0.12 | 0.05 | 0.05 | 0.02 | 0.03 | 0.02 | 0.01 | 0.21 | 0.1 | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 14 | 22 | 34 | 32 | 87.5 | 89.06 | 1 | 1 | 1.1 | 1 | 1.2 | 1 | 1.67 | 2 | 3 | 2 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 1.05 | -0 | 1.05 | -0 | 0.88 | 0.01 | 1.31 | 0 | 0.66 | 0.02 | 1 | 0 | 1 | 0 |
14184 | libgromacs.so.8 - lincs.cpp:966-978 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Innermost | 0.08 | 0.09 | 0.08 | 0.08 | 0.11 | 0.13 | 0.09 | 0.06 | 0.21 | 0.15 | 0.08 | 0.06 | 0.06 | 0.05 | 0.03 | 0.03 | 0.21 | 0.13 | 0.06 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 1 | 2 | 4 | 8 | 16 | 31 | 51 | 99 | 94.12 | 72.79 | 1 | 1.05 | 1.26 | 1 | 1.15 | 1.33 | 2 | 3 | 2.5 | 3 | 3 | 2 | 5 | 0 | 1 | 0 | 1 | 0 | 0.81 | 0.02 | 0.88 | 0.01 | 0.88 | 0.01 | 0.66 | 0.04 | 0.33 | 0.09 | 0.33 | 0.06 | 0.16 | 0.05 |
3495 | libgromacs.so.8 - pairlist.cpp:162-963 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.08 | 0.11 | 0.1 | 0.09 | 0.09 | 0.07 | 0.04 | 0.02 | 0.2 | 0.16 | 0.09 | 0.06 | 0.03 | 0.02 | 0.01 | 0.02 | 0.2 | 0.15 | 0.08 | 0.04 | 0.02 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 16 | 29 | 43 | 50 | 6.7 | 17.61 | 1 | 1 | 9.48 | 1 | 1.07 | 1.13 | 1.5 | 1.5 | 2 | 1 | 2 | 1 | 0.5 | 0 | 2 | 2 | 1 | 0 | 0.67 | 0.04 | 0.63 | 0.04 | 0.63 | 0.03 | 0.63 | 0.03 | 0.63 | 0.03 | 1 | 0 | 1 | 0 |
16179 | libgromacs.so.8 - pme_solve.cpp:533-542 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.08 | 0.06 | 0.07 | 0.05 | 0.04 | 0.03 | 0.02 | 0.01 | 0.2 | 0.11 | 0.06 | 0.03 | 0.02 | 0.03 | 0.01 | 0.01 | 0.2 | 0.08 | 0.05 | 0.02 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 12 | 16 | 24 | 29 | 87.5 | 89.06 | 1 | 1 | 1.1 | 1 | 1.38 | 1.2 | 1.5 | 2 | 3 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 1.25 | 0 | 1 | 0 | 1.25 | 0 | 1.25 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16192 | libgromacs.so.8 - pme_solve.cpp:456-469 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.07 | 0.04 | 0.04 | 0.05 | 0.03 | 0.03 | 0.02 | 0.01 | 0.17 | 0.06 | 0.04 | 0.04 | 0.02 | 0.01 | 0.02 | 0.01 | 0.17 | 0.06 | 0.03 | 0.02 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 12 | 19 | 21 | 28 | 5.88 | 14.71 | 1 | 2 | 10.67 | 1 | 1 | 1.33 | 2 | 2 | 1 | 2 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 1.42 | 0 | 1.42 | 0 | 1.06 | -0 | 1.06 | -0 | 1 | 0 | 1 | 0 | 1 | 0 |
15706 | libgromacs.so.8 - bonded.cpp:1913-2008 [...] | std::enable_if<(((BondedKernelFlavor)2)!=((BondedKernelFlavor)0))||(!(1)), float>::type (anonymous namespace)::pdihs<(BondedKernelFlavor)2>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, floa... | Innermost | 0.07 | 0.07 | 0.07 | 0.06 | 0.05 | 0.05 | 0.03 | 0.01 | 0.18 | 0.1 | 0.06 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0.18 | 0.09 | 0.05 | 0.02 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 14 | 21 | 28 | 29 | 0 | 14.03 | 1.22 | 1.15 | 7.63 | 1 | 1.11 | 1.2 | 2 | 2 | 2 | 1 | 1 | 2 | 0 | 0 | 3 | 1 | 1 | 0 | 1 | 0 | 0.9 | 0.01 | 1.13 | 0 | 1.13 | 0 | 0.56 | 0.02 | 1 | 0 | 1 | 0 |
14504 | libgromacs.so.8 - sim_util.cpp:466-466 [...] | setupForceOutputs(ForceHelperBuffers*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, gmx::DomainLifetimeWorkload const&, gmx::StepWorkload const&, bool, gmx_wallcycle*) | Single | 0.06 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.17 | | | | | | | | 0.17 | | | | | | | | 1 | | | | | | | | 0 | 18.75 | 1.5 | 1.5 | 10 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
16173 | libgromacs.so.8 - pme_solve.cpp:233-560 [...] | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Outermost | 0.06 | 0.08 | 0.07 | 0.06 | 0.06 | 0.06 | 0.04 | 0.01 | 0.15 | 0.15 | 0.07 | 0.06 | 0.03 | 0.02 | 0.01 | 0.01 | 0.15 | 0.12 | 0.05 | 0.02 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 16 | 25 | 33 | 38 | 52.89 | 46.86 | 1.48 | 1.05 | 1.36 | 1 | 1.25 | 1.4 | 3 | 3 | 2 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 0.63 | 0.03 | 0.75 | 0.02 | 0.94 | 0 | 0.94 | 0 | 0.47 | 0.03 | 1 | 0 | 1 | 0 |
14272 | libgromacs.so.8 - mdatoms.cpp:266-437 [...] | atoms2md(gmx_mtop_t const&, t_inputrec const&, int, gmx::ArrayRef<int>, int, gmx::MDAtoms*) [clone .extracted] | Outermost | 0.06 | 0.05 | 0.05 | 0.04 | 0.04 | 0.04 | 0.02 | 0.02 | 0.15 | 0.07 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.15 | 0.07 | 0.04 | 0.02 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 13 | 24 | 25 | 60 | 9.76 | 18.24 | 1.37 | 2.15 | 9.01 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1.07 | -0 | 0.94 | 0 | 0.94 | 0 | 0.94 | 0 | 0.47 | 0.02 | 1 | 0 | 1 | 0 |
15872 | libgromacs.so.8 - vec.h:141-345 [...] | do_pairs(int, int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float const*, float*, gmx::ArrayRef<float const>, gmx::ArrayRef<float const>, gmx::ArrayRef<bool const>, gmx::ArrayRef<un... | Single | 0.06 | 0.08 | 0.07 | 0.08 | 0.05 | 0.03 | 0.03 | 0.01 | 0.16 | 0.13 | 0.05 | 0.05 | 0.02 | 0.01 | 0.01 | 0.01 | 0.16 | 0.11 | 0.05 | 0.03 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 14 | 18 | 28 | 30 | 15.82 | 18.39 | 1.53 | 1.36 | 9.04 | 1 | 1.18 | 1 | 1.67 | 2 | 1 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 0.73 | 0.02 | 0.8 | 0.01 | 0.67 | 0.03 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
14607 | libgromacs.so.8 - update.cpp:367-393 [...] | gmx::Update::Impl::update_coords(t_inputrec const&, long, int, bool, gmx::ArrayRef<ParticleType const>, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, t_state*, gmx::ArrayRefWithPadding<gmx::BasicVe... | Single | 0.05 | 0.05 | 0.06 | 0.08 | 0.06 | 0.05 | 0.05 | 0.03 | 0.13 | 0.08 | 0.06 | 0.05 | 0.02 | 0.02 | 0.02 | 0.02 | 0.13 | 0.07 | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 16 | 21 | 36 | 74 | 35.29 | 25.74 | 1.07 | 1.17 | 4.13 | 1 | 1.14 | 1.2 | 1.67 | 2 | 2 | 2 | 2 | 1 | 1 | 5 | 1 | 0 | 1 | 0 | 0.93 | 0 | 0.65 | 0.02 | 0.54 | 0.04 | 0.81 | 0.01 | 0.41 | 0.03 | 1 | 0 | 1 | 0 |
4128 | libgromacs.so.8 - hashedmap.h:274-281 [...] | int assignInteractionsForAtom<true>(AtomIndexSet const&, reverse_ilist_t const&, gmx_ga2la_t const&, gmx_domdec_zones_t const&, bool, int const*, bool, float, t_pbc const*, gmx::ArrayRef<gmx::BasicVector<float> const>, Int... | Outermost | 0.05 | 0.04 | 0.02 | 0.04 | 0.04 | 0.04 | 0.01 | 0.01 | 0.14 | 0.07 | 0.04 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0.14 | 0.05 | 0.02 | 0.02 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 2 | 6 | 10 | 17 | 16 | 28 | 6.25 | 16.41 | 3.07 | 1 | 16.6 | 1 | 1.4 | 1.33 | 2 | 2 | 2 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1.4 | 0 | 1.75 | 0 | 0.88 | 0 | 0.88 | 0 | 0.44 | 0.02 | 1 | 0 | 1 | 0 |
16376 | libgromacs.so.8 - fft5d.cpp:849-855 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.04 | 0.05 | 0.06 | 0.08 | 0.05 | 0.05 | 0.04 | 0.02 | 0.11 | 0.07 | 0.05 | 0.06 | 0.03 | 0.02 | 0.01 | 0.02 | 0.11 | 0.07 | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 8 | 13 | 19 | 31 | 55 | 0 | 18.24 | 1 | 1 | 5.69 | 1 | 1 | 1 | 2 | 3 | 2 | 1 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 0.79 | 0.01 | 0.55 | 0.03 | 0.46 | 0.04 | 0.69 | 0.02 | 0.34 | 0.03 | 1 | 0 | 1 | 0 |
16183 | libgromacs.so.8 - pme_solve.cpp:498-510 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.04 | 0.03 | 0.03 | 0.03 | 0.01 | 0.02 | 0.01 | 0.01 | 0.1 | 0.04 | 0.03 | 0.02 | 0.01 | 0.01 | 0 | 0.01 | 0.1 | 0.04 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 7 | 7 | 14 | 10 | 15 | 100 | 90.91 | 1 | 1 | 1.1 | 1 | 1 | 1.5 | 2 | 1 | 1 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 1 | 0 | 1.25 | 0 | 1.25 | 0 | 1.25 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16370 | libgromacs.so.8 - fft5d.cpp:912-918 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | InBetween | 0.04 | 0.02 | 0.03 | 0.03 | 0.03 | 0.03 | 0.02 | 0.01 | 0.1 | 0.04 | 0.05 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.1 | 0.04 | 0.03 | 0.01 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 11 | 18 | 25 | 31 | 0 | 18.45 | 2.74 | 1 | 7.08 | 1 | 1.33 | 1.67 | 3 | 2 | 2 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1.25 | 0 | 0.83 | 0 | 1.25 | 0 | 0.63 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 |
16193 | libgromacs.so.8 - pme_solve.cpp:440-453 | solve_pme_yzx(gmx_pme_t const*, t_complex*, float, bool, int, int) | Innermost | 0.04 | 0.05 | 0.06 | 0.04 | 0.04 | 0.03 | 0.03 | 0.01 | 0.11 | 0.07 | 0.07 | 0.04 | 0.02 | 0.02 | 0.02 | 0.01 | 0.11 | 0.07 | 0.05 | 0.02 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 14 | 18 | 28 | 29 | 5.88 | 14.71 | 1 | 2 | 10.67 | 1 | 1.17 | 1.4 | 2 | 2 | 2 | 2 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 0.79 | 0.01 | 0.55 | 0.03 | 0.69 | 0.01 | 0.69 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 |
16085 | libgromacs.so.8 - pme_grid.cpp:537-539 | unwrap_periodic_pmegrid(gmx_pme_t*, float*) [clone .extracted] | Innermost | 0.04 | 0.06 | 0.08 | 0.07 | 0.05 | 0.08 | 0.22 | 0.22 | 0.1 | 0.09 | 0.08 | 0.04 | 0.03 | 0.02 | 0.05 | 0.1 | 0.11 | 0.08 | 0.06 | 0.03 | 0.01 | 0.01 | 0.02 | 0.03 | 1 | 2 | 4 | 8 | 15 | 30 | 55 | 91 | 0 | 12.5 | 1 | 1 | 8 | 1 | 1.13 | 1.6 | 1.33 | 3 | 2 | 1.67 | 2.5 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0.69 | 0.02 | 0.46 | 0.04 | 0.46 | 0.04 | 0.69 | 0.02 | 0.34 | 0.05 | 0.09 | 0.2 | 0.03 | 0.21 |
16062 | libgromacs.so.8 - pme_grid.cpp:440-442 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.04 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.11 | | | | | | | | 0.11 | | | | | | | | 1 | | | | | | | | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
3477 | libgromacs.so.8 - stl_vector.h:919-1798 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | InBetween | 0.04 | 0.04 | 0.04 | 0.04 | 0.04 | 0.03 | 0.01 | 0.01 | 0.11 | 0.05 | 0.05 | 0.03 | 0.02 | 0.02 | 0.01 | 0.02 | 0.11 | 0.05 | 0.03 | 0.02 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 13 | 19 | 16 | 21 | 22.31 | 27.98 | 2.3 | 1 | 1.77 | 1 | 1 | 1.67 | 1.5 | 2 | 2 | 1 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 1.1 | -0 | 0.92 | 0 | 0.69 | 0.01 | 0.69 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 |
15651 | libgromacs.so.8 - bonded.cpp:2179-2256 [...] | std::enable_if<((BondedKernelFlavor)0)==((BondedKernelFlavor)0), float>::type (anonymous namespace)::rbdihs<(BondedKernelFlavor)0>(int, int const*, t_iparams const*, float const (*) [3], float (*) [4], float (*) [3], t_pbc const*, float, float*... | Single | 0.03 | 0.02 | 0.04 | 0.02 | 0.03 | 0.02 | 0.01 | 0.01 | 0.09 | 0.04 | 0.04 | 0.04 | 0.03 | 0.03 | 0.01 | 0.01 | 0.09 | 0.04 | 0.03 | 0.01 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 4 | 8 | 10 | 12 | 20 | 59.09 | 62.94 | 1.38 | 1 | 1.33 | 1 | 1.33 | 1.33 | 2 | 3 | 3 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1.13 | -0 | 0.75 | 0.01 | 1.13 | -0 | 0.56 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 |
4119 | libgromacs.so.8 - stl_vector.h:346-1762 [...] | void make_exclusions_zone<true>(gmx::ArrayRef<int const>, gmx_ga2la_t const&, gmx_domdec_zones_t const&, gmx::ArrayRef<MolblockIndices const>, std::vector<gmx_moltype_t, std::allocator<gmx_moltype_t> > const&, gmx:... | InBetween | 0.03 | 0.02 | 0.03 | 0.02 | 0.03 | 0.06 | 0.05 | 0.02 | 0.08 | 0.03 | 0.02 | 0.03 | 0.02 | 0.02 | 0.02 | 0.02 | 0.08 | 0.03 | 0.02 | 0.01 | 0.01 | 0.01 | 0 | 0 | 1 | 2 | 4 | 7 | 12 | 24 | 38 | 53 | 0 | 22.07 | 1 | 1 | 14.99 | 1 | 1 | 1 | 3 | 2 | 2 | 2 | 2 | NA | NA | NA | NA | NA | 1 | 0 | 1.33 | 0 | 1 | 0 | 1 | 0 | 0.5 | 0.01 | 0.25 | 0.04 | 1 | 0 | 1 | 0 |
3517 | libgromacs.so.8 - pairlist.cpp:2082-2086 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.03 | 0.04 | 0.03 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.08 | 0.08 | 0.04 | 0.02 | 0.01 | 0.02 | 0.01 | 0.01 | 0.08 | 0.06 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 10 | 12 | 16 | 16 | 0 | 13.1 | 1 | 1 | 8 | 1 | 1.33 | 2 | 2 | 1 | 2 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 0.67 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
3515 | libgromacs.so.8 - pairlist.cpp:2092-2096 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.03 | 0.02 | 0.03 | 0.02 | 0.01 | 0.03 | 0.01 | 0.01 | 0.09 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0 | 0.01 | 0.09 | 0.03 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 8 | 4 | 17 | 16 | 17 | 0 | 13.02 | 1 | 1 | 8 | 1 | 1.33 | 1 | 2 | 1 | 1 | 0 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1.5 | 0 | 1.13 | -0 | 1.13 | -0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
3487 | libgromacs.so.8 - pairlist.cpp:1341-1351 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | Innermost | 0.03 | 0.02 | 0.02 | 0.04 | 0.02 | 0.02 | 0.02 | 0.01 | 0.09 | 0.04 | 0.02 | 0.03 | 0.01 | 0.01 | 0.01 | 0.01 | 0.09 | 0.04 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 7 | 8 | 13 | 15 | 17 | 0 | 12.5 | 1 | 1 | 8 | 1 | 1.33 | 2 | 1.5 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 1.13 | -0 | 2.25 | 0 | 1.13 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
13612 | libgromacs.so.8 - calcvir.cpp:61-67 [...] | calc_vir(int, float const (*) [3], float const (*) [3], float (*) [3], bool, float const (*) [3]) | Single | 0.03 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.08 | | | | | | | | 0.08 | | | | | | | | 1 | | | | | | | | 64.29 | 54.46 | 1 | 1.09 | 1.45 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
14183 | libgromacs.so.8 - lincs.cpp:1205-1205 [...] | gmx::do_lincs(gmx::ArrayRefWithPadding<gmx::BasicVector<float> const>, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, float const (*) [3], t_pbc*, gmx::Lincs*, int, gmx::ArrayRef<float const>, t_commrec const*, bool, floa... | Innermost | 0.02 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.05 | 0.02 | 0.03 | 0.02 | 0.01 | 0.01 | 0 | 0.01 | 0.04 | 0.01 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 3 | 6 | 6 | 8 | 10 | 28 | 100 | 100 | 1 | 1.2 | 1.2 | 1 | 2 | 1.5 | 2 | 1 | 0 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 0.5 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
3485 | libgromacs.so.8 - pairlist.cpp:1330-1430 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | InBetween | 0.02 | 0.02 | 0.02 | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 0.06 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.01 | 0.06 | 0.03 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 6 | 6 | 11 | 19 | 19 | 0 | 18.75 | 1 | 1 | 7.08 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1 | 0 | 1.5 | 0 | 0.75 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
14507 | libgromacs.so.8 - sim_util.cpp:149-150 [...] | sum_forces(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<gmx::BasicVector<float> const>) [clone .extracted] | Single | 0.02 | 0.01 | 0.02 | 0.01 | 0.02 | 0.03 | 0.02 | 0.02 | 0.06 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.02 | 0.02 | 0.06 | 0.02 | 0.01 | 0.01 | 0.01 | 0 | 0 | 0 | 1 | 2 | 4 | 5 | 12 | 20 | 21 | 50 | 28.57 | 23.21 | 1 | 1 | 5.33 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 1.5 | 0 | 1.5 | 0 | 0.75 | 0 | 0.38 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 |
3489 | libgromacs.so.8 - pairlist.cpp:162-4097 [...] | PairlistSet::constructPairlists(gmx::InteractionLocality, Nbnxm::GridSet const&, gmx::ArrayRef<PairsearchWork>, nbnxn_atomdata_t*, gmx::ListOfLists<int> const&, int, t_nrnb*, SearchCycleCounting*) [clone .extracted.67] | InBetween | 0.02 | 0.02 | 0.02 | 0.03 | 0.01 | 0.01 | 0.01 | 0.01 | 0.05 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0 | 0.01 | 0.04 | 0.02 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 7 | 8 | 9 | 13 | 14 | 7.69 | 16.47 | 1.45 | 1.47 | 9.58 | 1 | 2 | 2 | 2 | 1 | 1 | 0 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1 | 0 | 0.5 | 0.01 | 0.5 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4399 | libgromacs.so.8 - vec.h:141-198 [...] | dd_redistribute_cg(_IO_FILE*, long, gmx_domdec_t*, int*, t_state*, t_forcerec*, t_nrnb*, int*) [clone .extracted] | InBetween | 0.02 | 0.02 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.04 | 0.03 | 0.04 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.04 | 0.03 | 0.02 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 7 | 9 | 9 | 11 | 23 | 16.67 | 19.42 | 1.76 | 1.9 | 9.08 | 1 | 1.5 | 2 | 1 | 2 | 0 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 0.67 | 0.01 | 0.5 | 0.01 | 0.5 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16090 | libgromacs.so.8 - pme_grid.cpp:520-522 | unwrap_periodic_pmegrid(gmx_pme_t*, float*) [clone .extracted.30] | Innermost | 0.02 | 0.03 | 0.03 | 0.04 | 0.02 | 0.02 | 0.06 | 0.1 | 0.04 | 0.05 | 0.02 | 0.03 | 0.01 | 0.02 | 0.02 | 0.04 | 0.04 | 0.05 | 0.02 | 0.02 | 0 | 0 | 0.01 | 0.01 | 1 | 2 | 4 | 6 | 9 | 11 | 42 | 94 | 0 | 12.5 | 1 | 1.5 | 12 | 1 | 1.25 | 1 | 1.5 | 1 | 2 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0.4 | 0.02 | 0.5 | 0.01 | 0.25 | 0.03 | 1 | 0 | 1 | 0 | 0.06 | 0.06 | 0.03 | 0.1 |
14502 | libgromacs.so.8 - sim_util.cpp:466-466 [...] | setupForceOutputs(ForceHelperBuffers*, gmx::ArrayRefWithPadding<gmx::BasicVector<float> >, gmx::DomainLifetimeWorkload const&, gmx::StepWorkload const&, bool, gmx_wallcycle*) | Single | 0.02 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.05 | | | | | | | | 0.05 | | | | | | | | 1 | | | | | | | | 0 | 18.75 | 1.5 | 1.5 | 10 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
16055 | libgromacs.so.8 - pme_grid.cpp:469-471 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | | | | | | | | 0.02 | | | | | | | | 1 | | | | | | | | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
16059 | libgromacs.so.8 - pme_grid.cpp:453-455 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | Innermost | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.03 | | | | | | | | 0.03 | | | | | | | | 1 | | | | | | | | 0 | 12.5 | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | | | | | | | | | | | | | | |
4839 | libgromacs.so.8 - threaded_force_buffer.cpp:170-211 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | Outermost | 0.01 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 6 | 7 | 11 | 10 | 20 | 5 | 19.38 | 2.96 | 1 | 6.93 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1 | 0 | 0.5 | 0.01 | 0.25 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
14222 | libgromacs.so.8 - lincs.cpp:1305-1374 [...] | gmx::set_lincs_matrix(gmx::Lincs*, gmx::ArrayRef<float const>, float) [clone .extracted] | InBetween | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.04 | 0.02 | 0.02 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.04 | 0.02 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 5 | 4 | 6 | 18 | 31 | 0 | 14.71 | 2 | 2.46 | 7.5 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | NA | NA | NA | NA | NA | 1 | 0 | 1 | 0 | 1 | 0 | 0.5 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16061 | libgromacs.so.8 - pme_grid.cpp:438-442 | wrap_periodic_pmegrid(gmx_pme_t const*, float*) | InBetween | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.02 | | | | | | | | 0.02 | | | | | | | | 1 | | | | | | | | 0 | 22.5 | 1 | 1 | 6.46 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | 1 | 0 | | | | | | | | | | | | | | |
16067 | libgromacs.so.8 - pme_grid.cpp:502-504 | unwrap_periodic_pmegrid(gmx_pme_t*, float*) | Innermost | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.03 | 0.02 | 0.01 | 0.02 | 0.05 | 0.05 | 0.07 | 0.07 | 0.12 | 0.1 | 0.2 | 0.02 | 0.03 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 12.5 | 1 | 1.5 | 12 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0.33 | 0.01 | 0.5 | 0.01 | 0.25 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4844 | libgromacs.so.8 - threaded_force_buffer.cpp:182-186 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | Innermost | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 0 | 0 | 0.03 | 0.01 | | | | | | | 0.03 | 0.01 | | | | | | | 1 | 2 | | | | | | | 33.33 | 33.33 | 1.35 | 1 | 3.83 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1.5 | 0.5 | 0 | 1 | 1 | 1 | 0 | 1.5 | 0 | | | | | | | | | | | | |
16377 | libgromacs.so.8 - fft5d.cpp:853-855 | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Innermost | 0.01 | 0.01 | 0.02 | 0.02 | 0.01 | 0.02 | 0.03 | 0.01 | 0.03 | 0.02 | 0.01 | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 0.03 | 0.02 | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 6 | 6 | 10 | 24 | 34 | 0 | 25 | 1 | 1 | 4 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0.75 | 0 | 0.75 | 0.01 | 0.38 | 0.01 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1933 | libgromacs.so.8 - atomdata.cpp:1078-1080 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0.02 | 0.04 | 0.06 | 0.07 | 0.1 | 0.11 | 0.03 | | 0.03 | 0.07 | 0.07 | 0.08 | 0.13 | 0.15 | 0.08 | | 0.03 | 0.03 | 0.02 | 0.02 | 0.01 | 0.01 | 0 | | 2 | 4 | 5 | 9 | 9 | 11 | 20 | 100 | 100 | 1 | 1 | 1 | 0 | 1.5 | 2.33 | 1.75 | 2.67 | 2.6 | 2.5 | 2.67 | 0 | 1 | 0 | 0 | 1 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1939 | libgromacs.so.8 - atomdata.cpp:1176-1180 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0 | 0 | 0.04 | 0.1 | 0.19 | 0.23 | 0.18 | | | | 0.03 | 0.06 | 0.06 | 0.05 | 0.06 | | | | 0.01 | 0.02 | 0.03 | 0.02 | 0.02 | | | | 8 | 15 | 32 | 64 | 128 | 23.53 | 27.94 | 2.29 | 1 | 5.93 | 0 | 0 | 0 | 3 | 3 | 2 | 2.5 | 3 | NA | NA | NA | NA | NA | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1931 | libgromacs.so.8 - atomdata.cpp:1022-1192 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | InBetween | 0 | 0.03 | 0.04 | 0.03 | 0.03 | 0.02 | 0.01 | 0.01 | | 0.05 | 0.04 | 0.02 | 0.02 | 0.01 | 0.02 | 0.01 | | 0.05 | 0.03 | 0.01 | 0.01 | 0 | 0 | 0 | | 2 | 4 | 7 | 12 | 14 | 11 | 25 | 7.41 | 20.25 | 4.1 | 1 | 15.74 | 0 | 1 | 1.33 | 2 | 2 | 1 | 2 | 1 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4840 | libgromacs.so.8 - threaded_force_buffer.cpp:207-211 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | InBetween | 0 | 0.02 | 0.05 | 0.03 | 0.03 | 0.03 | 0.04 | 0.02 | | 0.04 | 0.05 | 0.03 | 0.01 | 0.02 | 0.02 | 0.02 | | 0.03 | 0.04 | 0.01 | 0.01 | 0 | 0 | 0 | | 2 | 4 | 7 | 12 | 17 | 33 | 50 | 0 | 20 | 2 | 1 | 6.89 | 0 | 1.33 | 1.25 | 3 | 1 | 2 | 2 | 2 | 2.5 | 0 | 0 | 2.75 | 0.75 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16312 | libgromacs.so.8 - pme_spread.cpp:172-174 | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.18] | Innermost | 0 | 0.12 | 0.16 | 0.15 | 0.19 | 0.33 | 0.32 | 0.18 | | 0.17 | 0.14 | 0.08 | 0.07 | 0.08 | 0.06 | 0.06 | | 0.17 | 0.12 | 0.06 | 0.04 | 0.05 | 0.03 | 0.02 | | 2 | 4 | 8 | 16 | 32 | 64 | 127 | 0 | 12.5 | 1 | 1 | 8 | 0 | 1 | 1.17 | 1.33 | 1.75 | 2 | 2 | 3 | 0 | 2 | 0 | 0 | 1 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
13616 | libgromacs.so.8 - calcvir.cpp:61-67 [...] | calc_vir(int, float const (*) [3], float const (*) [3], float (*) [3], bool, float const (*) [3]) [clone .extracted] | Innermost | 0 | 0.03 | 0.04 | 0.06 | 0.03 | 0.02 | 0.01 | 0.01 | | 0.05 | 0.05 | 0.04 | 0.02 | 0.01 | 0.01 | 0.01 | | 0.04 | 0.03 | 0.02 | 0.01 | 0 | 0 | 0 | | 2 | 4 | 8 | 8 | 15 | 15 | 26 | 64.29 | 54.46 | 1 | 1.09 | 1.45 | 0 | 1.25 | 1.67 | 2 | 2 | 1 | 1 | 1 | 0 | 0 | 2 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1936 | libgromacs.so.8 - atomdata.cpp:1091-1093 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0 | 0.04 | 0.09 | 0.19 | 0.24 | 0.81 | 0.52 | | | 0.06 | 0.07 | 0.07 | 0.1 | 0.17 | 0.25 | | | 0.03 | 0.04 | 0.04 | 0.03 | 0.08 | 0.07 | | | 3 | 6 | 13 | 29 | 62 | 122 | 100 | 100 | 1 | 1 | 1 | 0 | 0 | 2 | 1.4 | 1.4 | 2.5 | 2.13 | 3.57 | 0 | 1 | 0 | 0 | 1 | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16290 | libgromacs.so.8 - pme_spread.cpp:441-447 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | Innermost | 0 | 0.01 | 0.02 | 0.01 | 0.01 | 0.02 | 0.01 | 0.03 | | 0.01 | 0.03 | 0.01 | 0.02 | 0.01 | 0.01 | 0.02 | | 0.01 | 0.01 | 0 | 0 | 0 | 0 | 0 | | 2 | 4 | 4 | 5 | 13 | 16 | 63 | 0 | 25 | 1 | 1 | 4 | 0 | 1 | 3 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16264 | libgromacs.so.8 - pme_spread.cpp:639-641 | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted] | Innermost | 0 | 0.02 | 0.04 | 0.09 | 0.12 | 0.21 | 0.37 | 0.56 | | 0.03 | 0.04 | 0.04 | 0.04 | 0.05 | 0.08 | 0.22 | | 0.03 | 0.03 | 0.03 | 0.03 | 0.03 | 0.04 | 0.08 | | 2 | 4 | 8 | 15 | 32 | 64 | 128 | 100 | 100 | 1 | 1 | 1 | 0 | 1.5 | 1.33 | 1.33 | 1.33 | 1.67 | 2 | 3.14 | 0 | 2 | 0 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4841 | libgromacs.so.8 - threaded_force_buffer.cpp:209-211 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | Innermost | 0 | 0.05 | 0.13 | 0.14 | 0.19 | 0.13 | 0.18 | 0.09 | | 0.07 | 0.16 | 0.07 | 0.07 | 0.05 | 0.06 | 0.05 | | 0.07 | 0.1 | 0.05 | 0.04 | 0.02 | 0.02 | 0.01 | | 2 | 4 | 8 | 16 | 29 | 60 | 110 | 40 | 25 | 1 | 2.18 | 5.5 | 0 | 1 | 1.6 | 1.4 | 1.75 | 2.5 | 3 | 5 | 1 | 1 | 0 | 0 | 1 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16309 | libgromacs.so.8 - pme_spread.cpp:197-199 | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.11] | Innermost | 0 | 0.06 | 0.04 | 0.06 | 0.12 | 0.13 | 0.09 | 0.07 | | 0.12 | 0.04 | 0.04 | 0.05 | 0.04 | 0.03 | 0.03 | | 0.08 | 0.03 | 0.02 | 0.03 | 0.02 | 0.01 | 0.01 | | 2 | 4 | 8 | 16 | 31 | 51 | 106 | 100 | 100 | 1 | 1 | 1 | 0 | 1.5 | 1.33 | 2 | 1.67 | 2 | 3 | 3 | 0 | 2 | 0 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1935 | libgromacs.so.8 - atomdata.cpp:1088-1093 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | InBetween | 0 | 0.01 | 0.06 | 0.06 | 0.07 | 0.11 | 0.28 | 0.31 | | 0.04 | 0.1 | 0.05 | 0.03 | 0.05 | 0.09 | 0.17 | | 0.02 | 0.04 | 0.02 | 0.02 | 0.01 | 0.03 | 0.04 | | 1 | 3 | 6 | 14 | 24 | 58 | 115 | 22.22 | 38.89 | 1.75 | 1 | 1.35 | 0 | 1 | 1.67 | 1.67 | 1.5 | 2.5 | 3 | 4.25 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
4845 | libgromacs.so.8 - threaded_force_buffer.cpp:182-186 [...] | void gmx::(anonymous namespace)::reduceThreadForceBuffers<float [4]>(gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<std::unique_ptr<gmx::ThreadForceBuffer<float [4]>, std::default_delete<gmx::ThreadForceBuffer<fl... | Innermost | 0 | 0 | 0.01 | 0.02 | 0.02 | 0.05 | 0.07 | 0.04 | | | 0.01 | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | | | 0.01 | 0.01 | 0 | 0.01 | 0.01 | 0.01 | | | 3 | 6 | 8 | 22 | 50 | 89 | 36.36 | 34.09 | 2.46 | 1 | 3.75 | 0 | 0 | 1 | 2 | 1 | 2 | 2 | 2 | NA | NA | NA | NA | NA | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16263 | libgromacs.so.8 - pme_spread.cpp:635-641 | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted] | InBetween | 0 | 0.04 | 0.04 | 0.02 | 0.06 | 0.07 | 0.04 | 0.04 | | 0.05 | 0.04 | 0.02 | 0.03 | 0.03 | 0.02 | 0.03 | | 0.05 | 0.03 | 0.01 | 0.01 | 0.01 | 0 | 0.01 | | 2 | 4 | 8 | 15 | 25 | 37 | 83 | 0 | 21.88 | 1 | 1 | 7.35 | 0 | 1 | 1.33 | 2 | 3 | 3 | 2 | 3 | NA | NA | NA | NA | NA | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
14203 | libgromacs.so.8 - lincs.cpp:425-440 [...] | gmx::lincs_update_atoms_ind(gmx::ArrayRef<int const>, gmx::ArrayRef<(anonymous namespace)::AtomPair const>, float, gmx::ArrayRef<float const>, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<float const>, flo... | Single | 0 | 0.39 | 0.53 | 0.46 | 0.6 | 0.6 | 0.59 | 0.56 | | 0.55 | 0.53 | 0.26 | 0.19 | 0.13 | 0.1 | 0.16 | | 0.55 | 0.39 | 0.18 | 0.14 | 0.08 | 0.06 | 0.08 | | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 27.78 | 22.22 | 1 | 1.23 | 5.5 | 0 | 1 | 1.36 | 1.44 | 1.46 | 1.63 | 1.67 | 2.29 | 0 | 1 | 0 | 4 | 3 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1937 | libgromacs.so.8 - atomdata.cpp:1091-1093 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0 | 0 | 0 | 0 | 0.17 | 0.58 | 2.5 | | | | | | 0.06 | 0.2 | 0.7 | | | | | | 0.02 | 0.06 | 0.34 | | | | | | 27 | 59 | 124 | 100 | 100 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 3.33 | 2.12 | 0 | 1 | 0 | 0 | 2 | | | | | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 |
16262 | libgromacs.so.8 - pme_spread.cpp:639-641 | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted] | Innermost | 0 | 0.15 | 0.16 | 0.25 | 0.76 | 0.58 | 0.47 | 0.91 | | 0.22 | 0.15 | 0.14 | 0.23 | 0.13 | 0.1 | 0.3 | | 0.22 | 0.12 | 0.1 | 0.17 | 0.08 | 0.05 | 0.12 | | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 0 | 12.5 | 1 | 1 | 8 | 0 | 1.05 | 1.25 | 1.4 | 1.35 | 1.63 | 2 | 2.5 | 0 | 2 | 0 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1934 | libgromacs.so.8 - atomdata.cpp:1078-1080 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0 | 0 | 0 | 0.01 | 0.04 | 0.08 | 0.08 | | | | | 0 | 0.03 | 0.08 | 0.21 | | | | | 0 | 0.01 | 0.01 | 0.01 | | | | | 4 | 12 | 19 | 25 | 100 | 100 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 2.67 | 3.5 | 0 | 1 | 0 | 0 | 2 | | | | | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
1938 | libgromacs.so.8 - atomdata.cpp:1176-1180 [...] | nbnxn_atomdata_add_nbat_f_to_f_reduce(nbnxn_atomdata_t*, int) [clone .extracted] | Innermost | 0 | 0.03 | 0.03 | 0.06 | 0.04 | 0.02 | 0.03 | 0.01 | | 0.05 | 0.03 | 0.05 | 0.02 | 0.02 | 0.04 | 0.01 | | 0.04 | 0.02 | 0.02 | 0.01 | 0 | 0 | 0 | | 2 | 4 | 8 | 15 | 11 | 22 | 19 | 26.67 | 30.42 | 2.63 | 1 | 4.91 | 0 | 1.25 | 1.5 | 2.5 | 2 | 2 | 4 | 1 | 1.5 | 1 | 0.5 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16367 | libgromacs.so.8 - fft5d.cpp:758-1369 [...] | fft5d_execute(fft5d_plan_t*, int, gmx_wallcycle*) | Outermost | 0 | 0 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | | | 0.01 | 0.01 | 0 | 0.01 | 0.01 | 0.01 | | | 0 | 0 | 0 | 0 | 0 | 0 | | | 2 | 3 | 9 | 5 | 12 | 23 | 0 | 17.02 | 1 | 1 | 8.36 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | NA | NA | NA | NA | NA | | | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
16320 | libgromacs.so.8 - pme_spread.cpp:104-145 [...] | spread_on_grid(gmx_pme_t const*, PmeAtomComm*, pmegrids_t const*, bool, bool, float*, bool, int) [clone .extracted.18] | Innermost | 0 | 0.78 | 0.8 | 0.71 | 1.04 | 1.21 | 1.18 | 0.8 | | 1.12 | 0.63 | 0.3 | 0.33 | 0.21 | 0.17 | 0.19 | | 1.09 | 0.59 | 0.28 | 0.24 | 0.17 | 0.12 | 0.11 | | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 17.65 | 19.12 | 1.31 | 1.9 | 4.58 | 0 | 1.03 | 1.09 | 1.07 | 1.43 | 1.31 | 1.42 | 1.9 | 1 | 4 | 1 | 0 | 9 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |
15990 | libgromacs.so.8 - pme.cpp:1397-1407 | gmx_pme_do(gmx_pme_t*, gmx::ArrayRef<gmx::BasicVector<float> const>, gmx::ArrayRef<gmx::BasicVector<float> >, gmx::ArrayRef<float const>, gmx::ArrayRef<float const>, gmx::ArrayRef<float const>, gmx::ArrayRef<flo... | Single | 0 | 0 | 0 | 0 | 0 | 0 | 0.01 | 0.01 | | | | | | | 0 | 0.01 | | | | | | | 0 | 0 | | | | | | | 12 | 20 | 0 | 17.94 | 3.42 | 1 | 10.78 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4.5 | 0 | 0 | 0 | 2 | | | | | | | | | | | | | 1 | 0 | 1 | 0 |
2070 | libgromacs.so.8 - kernel_common.cpp:56-76 [...] | clearForceBuffer(nbnxn_atomdata_t*, int) | Single | 0 | 0.17 | 0.31 | 0.62 | 0.73 | 1.31 | 3.94 | 8.56 | | 0.28 | 0.25 | 0.3 | 0.22 | 0.31 | 0.62 | 1.87 | | 0.25 | 0.23 | 0.25 | 0.17 | 0.18 | 0.41 | 1.16 | | 2 | 4 | 8 | 16 | 32 | 64 | 128 | 53.57 | 65.18 | 1 | 1.75 | 2.15 | 0 | 1.17 | 1.14 | 1.25 | 1.38 | 1.82 | 1.59 | 1.7 | 0 | 1.33 | 0.33 | 0 | 0 | | | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 |