OV - gmx_mpi - Topology

Software Topology

▼Scalability - 1x1

Number processes: 1 Number nodes: 1 Number processes per node: 1 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	1	1	1777.67
►Process 14984+		1	1777.67
○Thread 14984			1777.67

▶Scalability - 2x1

Number processes: 2 Number nodes: 1 Number processes per node: 2 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	2	2	917.33
►Process 15120+		1	917.33
○Thread 15120			917.33
►Process 15187+		1	917.15
○Thread 15187			917.15

▶Scalability - 4x1

Number processes: 4 Number nodes: 1 Number processes per node: 4 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	4	4	474.69
►Process 15299+		1	474.45
○Thread 15299			474.45
►Process 15300+		1	474.32
○Thread 15300			474.32
►Process 15301+		1	474.28
○Thread 15301			474.28
►Process 15500+		1	474.69
○Thread 15500			474.69

▶Scalability - 8x1

Number processes: 8 Number nodes: 1 Number processes per node: 8 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	8	8	251.6
►Process 15620+		1	251.23
○Thread 15620			251.23
►Process 15621+		1	251.27
○Thread 15621			251.27
►Process 15622+		1	251.28
○Thread 15622			251.28
►Process 15623+		1	251.07
○Thread 15623			251.07
►Process 15624+		1	251.47
○Thread 15624			251.47
►Process 15625+		1	251.6
○Thread 15625			251.6
►Process 15626+		1	251.09
○Thread 15626			251.09
►Process 15662+		1	250.97
○Thread 15662			250.97

▶Scalability - 16x1

Number processes: 16 Number nodes: 1 Number processes per node: 16 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	16	16	134.8
►Process 15759+		1	134.8
○Thread 15759			134.8
►Process 15760+		1	134.47
○Thread 15760			134.47
►Process 15761+		1	134.59
○Thread 15761			134.59
►Process 15762+		1	134.47
○Thread 15762			134.47
►Process 15763+		1	134.6
○Thread 15763			134.6
►Process 15764+		1	134.36
○Thread 15764			134.36
►Process 15765+		1	134.44
○Thread 15765			134.44
►Process 15766+		1	134.41
○Thread 15766			134.41
►Process 15767+		1	134.52
○Thread 15767			134.52
►Process 15768+		1	134.46
○Thread 15768			134.46
►Process 15769+		1	134.73
○Thread 15769			134.73
►Process 15770+		1	134.38
○Thread 15770			134.38
►Process 15771+		1	134.57
○Thread 15771			134.57
►Process 15772+		1	134.65
○Thread 15772			134.65
►Process 15773+		1	134.73
○Thread 15773			134.73
►Process 15849+		1	134.32
○Thread 15849			134.32

▶Scalability - 32x1

Number processes: 32 Number nodes: 1 Number processes per node: 32 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	32	32	80.55
►Process 16023+		1	79
○Thread 16023			79
►Process 16024+		1	80.45
○Thread 16024			80.45
►Process 16025+		1	80.32
○Thread 16025			80.32
►Process 16026+		1	80.45
○Thread 16026			80.45
►Process 16027+		1	78.75
○Thread 16027			78.75
►Process 16028+		1	78.68
○Thread 16028			78.68
►Process 16029+		1	80.17
○Thread 16029			80.17
►Process 16030+		1	80.35
○Thread 16030			80.35
►Process 16031+		1	80.38
○Thread 16031			80.38
►Process 16032+		1	80.34
○Thread 16032			80.34
►Process 16033+		1	80.5
○Thread 16033			80.5
►Process 16034+		1	80.35
○Thread 16034			80.35
►Process 16035+		1	78.71
○Thread 16035			78.71
►Process 16036+		1	80.39
○Thread 16036			80.39
►Process 16037+		1	80.31
○Thread 16037			80.31
►Process 16038+		1	80.35
○Thread 16038			80.35
►Process 16039+		1	80.24
○Thread 16039			80.24
►Process 16091+		1	78.76
○Thread 16091			78.76
►Process 16093+		1	80.43
○Thread 16093			80.43
►Process 16094+		1	80.52
○Thread 16094			80.52
►Process 16095+		1	80.31
○Thread 16095			80.31
►Process 16106+		1	80.36
○Thread 16106			80.36
►Process 16135+		1	80.47
○Thread 16135			80.47
►Process 16137+		1	80.55
○Thread 16137			80.55
►Process 16139+		1	80.41
○Thread 16139			80.41
►Process 16141+		1	80.39
○Thread 16141			80.39
►Process 16143+		1	78.58
○Thread 16143			78.58
►Process 16145+		1	80.47
○Thread 16145			80.47
►Process 16146+		1	78.52
○Thread 16146			78.52
►Process 16147+		1	78.8
○Thread 16147			78.8
►Process 16151+		1	80.5
○Thread 16151			80.5
►Process 16209+		1	80.38
○Thread 16209			80.38

▶Scalability - 64x1

Number processes: 64 Number nodes: 1 Number processes per node: 64 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	64	64	45.97
►Process 16521+		1	45.62
○Thread 16521			45.62
►Process 16522+		1	45.79
○Thread 16522			45.79
►Process 16523+		1	45.71
○Thread 16523			45.71
►Process 16524+		1	43.98
○Thread 16524			43.98
►Process 16525+		1	45.86
○Thread 16525			45.86
►Process 16526+		1	44.05
○Thread 16526			44.05
►Process 16527+		1	45.64
○Thread 16527			45.64
►Process 16528+		1	45.58
○Thread 16528			45.58
►Process 16529+		1	45.68
○Thread 16529			45.68
►Process 16530+		1	45.72
○Thread 16530			45.72
►Process 16541+		1	43.83
○Thread 16541			43.83
►Process 16543+		1	45.79
○Thread 16543			45.79
►Process 16544+		1	45.57
○Thread 16544			45.57
►Process 16547+		1	43.97
○Thread 16547			43.97
►Process 16549+		1	45.71
○Thread 16549			45.71
►Process 16551+		1	45.65
○Thread 16551			45.65
►Process 16553+		1	45.58
○Thread 16553			45.58
►Process 16623+		1	45.82
○Thread 16623			45.82
►Process 16625+		1	45.63
○Thread 16625			45.63
►Process 16626+		1	45.75
○Thread 16626			45.75
►Process 16629+		1	45.53
○Thread 16629			45.53
►Process 16631+		1	45.8
○Thread 16631			45.8
►Process 16632+		1	44.2
○Thread 16632			44.2
►Process 16633+		1	45.72
○Thread 16633			45.72
►Process 16637+		1	45.54
○Thread 16637			45.54
►Process 16639+		1	43.98
○Thread 16639			43.98
►Process 16640+		1	45.75
○Thread 16640			45.75
►Process 16643+		1	45.75
○Thread 16643			45.75
►Process 16645+		1	44.02
○Thread 16645			44.02
►Process 16646+		1	45.3
○Thread 16646			45.3
►Process 16649+		1	45.69
○Thread 16649			45.69
►Process 16651+		1	45.67
○Thread 16651			45.67
►Process 16652+		1	45.87
○Thread 16652			45.87
►Process 16655+		1	43.86
○Thread 16655			43.86
►Process 16656+		1	43.84
○Thread 16656			43.84
►Process 16659+		1	45.74
○Thread 16659			45.74
►Process 16661+		1	43.74
○Thread 16661			43.74
►Process 16662+		1	45.63
○Thread 16662			45.63
►Process 16664+		1	45.71
○Thread 16664			45.71
►Process 16667+		1	45.72
○Thread 16667			45.72
►Process 16668+		1	45.83
○Thread 16668			45.83
►Process 16671+		1	45.81
○Thread 16671			45.81
►Process 16673+		1	43.98
○Thread 16673			43.98
►Process 16675+		1	45.74
○Thread 16675			45.74
►Process 16676+		1	45.76
○Thread 16676			45.76
►Process 16678+		1	45.71
○Thread 16678			45.71
►Process 16686+		1	45.71
○Thread 16686			45.71
►Process 16690+		1	45.81
○Thread 16690			45.81
►Process 16699+		1	45.83
○Thread 16699			45.83
►Process 16706+		1	44.06
○Thread 16706			44.06
►Process 16710+		1	45.75
○Thread 16710			45.75
►Process 16712+		1	45.84
○Thread 16712			45.84
►Process 16713+		1	44.23
○Thread 16713			44.23
►Process 16717+		1	45.86
○Thread 16717			45.86
►Process 16733+		1	43.94
○Thread 16733			43.94
►Process 16734+		1	45.7
○Thread 16734			45.7
►Process 16736+		1	45.65
○Thread 16736			45.65
►Process 16745+		1	45.97
○Thread 16745			45.97
►Process 16754+		1	44.03
○Thread 16754			44.03
►Process 16761+		1	45.89
○Thread 16761			45.89
►Process 16766+		1	45.83
○Thread 16766			45.83
►Process 16777+		1	45.84
○Thread 16777			45.84
►Process 16789+		1	43.92
○Thread 16789			43.92
►Process 16899+		1	45.69
○Thread 16899			45.69

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